RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ETNK2Q9NVF9 386 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 VPS54Q9P1Q0 977 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SLC9A8Q9Y2E8 581 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 A0A0U1RQV5 110 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 FAM237BA0A1B0GVD1 139 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SLC15A5A6NIM6 579 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CLCA1A8K7I4 914 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 F8WDY8 70 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 MMP20O60882 483 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SCGB2A1O75556 95 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SEMA3DO95025 777 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 NTSR2O95665 410 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 NAGAP17050 411 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 EN2P19622 333 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 NMT1P30419 496 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 RRM2P31350 389 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 HK3P52790 923 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 IRF9Q00978 393 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TEFQ10587 303 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TMEM115Q12893 351 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 TUBB3Q13509 450 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ZNF273Q14593 569 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SYT16Q17RD7 645 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ZNF829Q3KNS6 432 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 LRRC23Q53EV4 343 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 PAGE2BQ5JRK9 111 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SPATA46Q5T0L3 261 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 IER5Q5VY09 327 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 JADE1Q6IE81 842 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 WDR88Q6ZMY6 472 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TRMT10CQ7L0Y3 403 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 TAS1R1Q7RTX1 841 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 KLHL7Q8IXQ5 586 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TRPV3Q8NET8 790 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ZNF596Q8TC21 504 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 GPT2Q8TD30 523 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LKAAEAR1Q8TD35 194 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 FAM122AQ96E09 287 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 PRR14Q9BWN1 585 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 EGLN1Q9GZT9 426 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 OSGEPL1Q9H4B0 414 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SLITRK6Q9H5Y7 841 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 BARHL2Q9NY43 387 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 MARCH4Q9P2E8 410 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 DKK4Q9UBT3 224 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ZBTB1Q9Y2K1 713 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ZNF281Q9Y2X9 895 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 DCLK1O15075 740 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LDLRAD4O15165 306 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ADAMDEC1O15204 470 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ST8SIA3O43173 380 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 HCRTR2O43614 444 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LANCL1O43813 399 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ECI2O75521 394 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CRCPO75575 148 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SASH3O75995 380 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CSF2P04141 144 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 HMBSP08397 361 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 IQCF3P0C7M6 154 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 NPPBP16860 134 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 GJA1P17302 382 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 PFKLP17858 780 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ITGB6P18564 788 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 NFKB1P19838 968 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CD27P26842 260 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 RYKP34925 604 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 GPR15P49685 360 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 MRPL12P52815 198 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 AIF1P55008 147 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 STX17P56962 302 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SPIBQ01892 262 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 CALCOCO2Q13137 446 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ALCAMQ13740 583 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CRYMQ14894 314 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CLCA4Q14CN2 919 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 UGT8Q16880 541 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LRRC24Q50LG9 513 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 PIP5KL1Q5T9C9 394 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 ANGEL2Q5VTE6 544 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 NEPROQ6NW34 567 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 VASH1Q7L8A9 365 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 FAM131BQ86XD5 332 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 VGLL2Q8N8G2 317 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 FLAD1Q8NFF5 587 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TRIB2Q92519 343 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SNX19Q92543 992 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LPPQ93052 612 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 SLC41A2Q96JW4 573 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 QRFPRQ96P65 431 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 TRNT1Q96Q11 434 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 VRK1Q99986 396 aaPredicted RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 THAP2Q9H0W7 228 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 IPPKQ9H8X2 491 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 LIMA1Q9UHB6 759 aaKnown RBP4.8□□□□□ -1.64
SMG1-207ENST00000563235 SLC7A8Q9UHI5 535 aa4.8□□□□□ -1.64
SMG1-207ENST00000563235 CNOT7Q9UIV1 285 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms