RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DCAF12L2Q5VW00 463 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LRRC8EQ6NSJ5 796 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC30A6Q6NXT4 461 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 C9orf47Q6ZRZ4 202 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 CLEC17AQ6ZS10 378 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 TRILQ7L0X0 811 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 MEPCEQ7L2J0 689 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 PATL1Q86TB9 770 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 TBC1D26Q86UD7 250 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SNRNP27Q8WVK2 155 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SNAPC3Q92966 411 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 GTF3C6Q969F1 213 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LYZL4Q96KX0 146 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 BBS4Q96RK4 519 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 POLDIP3Q9BY77 421 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LHPPQ9H008 270 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM234AQ9H0X4 552 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 CDT1Q9H211 546 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SH2D4AQ9H788 454 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 PLAC1Q9HBJ0 212 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 RRP7BPQ9NSQ0 103 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 EHD2Q9NZN4 543 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 NDRG3Q9UGV2 375 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 INTS6Q9UL03 887 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 CNTNAP2Q9UHC6 1331 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 A0A0U1RQF3 1178 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 RPS10-NUDT3A0A1W2PQS6 291 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 KLRF2D3W0D1 207 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 MS4A18H0YCH9 400 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 I6L893 689 aaPredicted RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CHL1O00533 1208 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ERAL1O75616 437 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CRYABP02511 175 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 EIF2S1P05198 315 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 PCNAP12004 261 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 MYF6P23409 242 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 TM4SF1P30408 202 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CPOXP36551 454 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 NNMTP40261 264 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 RFX2P48378 723 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 THBS3P49746 956 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CLCN5P51795 746 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CDH8P55286 799 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CLDN2P57739 230 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ADORA2A-AS1P86434 159 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 PPATQ06203 517 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 STK4Q13043 487 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ACVR2BQ13705 512 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 GPR18Q14330 331 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 IRF3Q14653 427 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 RNPS1Q15287 305 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ALG11Q2TAA5 492 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 DCAF6Q58WW2 860 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 HIST2H2BCQ6DN03 193 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 HIST2H2BDQ6DRA6 164 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 KIAA1161Q6NSJ0 714 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CES5AQ6NT32 575 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 NCEH1Q6PIU2 408 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CHST9Q7L1S5 443 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CTU1Q7Z7A3 348 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 LINC00346Q8IVM7 164 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CCDC13Q8IYE1 715 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ARHGEF2Q92974 986 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 JAKMIP2Q96AA8 810 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 SRSF8Q9BRL6 282 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 NPFFR1Q9GZQ6 430 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 CATSPERBQ9H7T0 1116 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 KIF9Q9HAQ2 790 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 FBRSL1Q9HCM7 1045 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 PDE7BQ9NP56 450 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 NCKIPSDQ9NZQ3 722 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 A4GNTQ9UNA3 340 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 ADAM18Q9Y3Q7 739 aa3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 SRPRBQ9Y5M8 271 aaKnown RBP3.36□□□□□ -1.87
SHCBP1-202ENST00000563219 A0A1W2PRQ8 180 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 FRMD3A2A2Y4 597 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 TYW5A2RUC4 315 aaKnown RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM90A8PA6NJQ4 464 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 LRRC53A6NM62 1247 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 HSPB2A8KAH6 182 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 BECN2A8MW95 431 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 H3BNX3 289 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 H3BQ06 376 aaPredicted RBP3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 CTDSP2O14595 271 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 SPRY3O43610 288 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 KLK8O60259 260 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ATP2C2O75185 946 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 PGM3O95394 542 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 TFP02787 698 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 CYP1A2P05177 515 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 APOA4P06727 396 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 TUBBP07437 444 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 ADRB2P07550 413 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 HOXB5P09067 269 aa3.35□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM90A13PP0C7W8 464 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms