RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PSMD11O00231 422 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 LZTS3O60299 673 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 MMP20O60882 483 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 TM7SF2O76062 418 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 HEXIM1O94992 359 aaKnown RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 SLC4A1P02730 911 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 PIRTP0C851 137 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 C6P13671 934 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 MAT2AP31153 395 aaKnown RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 DHPSP49366 369 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 CDH17Q12864 832 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 SGCGQ13326 291 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 OLIG2Q13516 323 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 KCNJ11Q14654 390 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 CNGA3Q16281 694 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 SETMARQ53H47 684 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 WDR45BQ5MNZ6 344 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 IZUMO3Q5VZ72 239 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 LYSMD4Q5XG99 296 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 LRRC66Q68CR7 880 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 ARMCX6Q7L4S7 300 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 PPIL6Q8IXY8 311 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 MMGT1Q8N4V1 131 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 BLOC1S5Q8TDH9 187 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 ZC3H10Q96K80 434 aaKnown RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 GPR63Q9BZJ6 419 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 TRABDQ9H4I3 376 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 L2HGDHQ9H9P8 463 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 ARNT2Q9HBZ2 717 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 UTP11Q9Y3A2 253 aaKnown RBP18.86■□□□□ 0.61
RAB40C-207ENST00000563109 LRRK1Q38SD2 2015 aa18.86■□□□□ 0.61
RAB40C-207ENST00000563109 IGLON5A6NGN9 336 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 DNALI1O14645 258 aaPredicted RBP18.85■□□□□ 0.61
RAB40C-207ENST00000563109 LHCGRP22888 699 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 MAGEA6P43360 314 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 ACOX1Q15067 660 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 DENND2CQ68D51 928 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 CRTC1Q6UUV9 634 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 LIPIQ6XZB0 460 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 GLT6D1Q7Z4J2 308 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 TSPAN33Q86UF1 283 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 BBOF1Q8ND07 529 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 OR52K1Q8NGK4 314 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 CPT1BQ92523 772 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 BIRC7Q96CA5 298 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 SNF8Q96H20 258 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 SMIM14Q96QK8 99 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 TRIM31Q9BZY9 425 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 EPC1Q9H2F5 836 aa18.85■□□□□ 0.61
RAB40C-207ENST00000563109 ZFR2Q9UPR6 939 aaKnown RBP18.85■□□□□ 0.61
RAB40C-207ENST00000563109 TNRC6BQ9UPQ9 1833 aaKnown RBP18.84■□□□□ 0.61
RAB40C-207ENST00000563109 SPAG17Q6Q759 2223 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 IGHV4-34P06331 123 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
RAB40C-207ENST00000563109 PTPRRQ15256 657 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 ZNF284Q2VY69 593 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 DENND5AQ6IQ26 1287 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 LYSMD3Q7Z3D4 306 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 HOOK3Q86VS8 718 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 SLC41A1Q8IVJ1 513 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 RGL4Q8IZJ4 473 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 KLK6Q92876 244 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 SLC17A9Q9BYT1 436 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 ZFYVE1Q9HBF4 777 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 CASS4Q9NQ75 786 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 KCTD5Q9NXV2 234 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 SHOC2Q9UQ13 582 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 DMTF1Q9Y222 760 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 SPO11Q9Y5K1 396 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 TRPM6Q9BX84 2022 aa18.84■□□□□ 0.61
RAB40C-207ENST00000563109 MYLKQ15746 1914 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 SMAPO00193 183 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 LATO43561 262 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 CLDN7O95471 211 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 CRTAMO95727 393 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 CD27P26842 260 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 AKT2P31751 481 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 DPP6P42658 865 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 STC1P52823 247 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 CALCOCO2Q13137 446 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 RNASEH2BQ5TBB1 312 aaKnown RBP18.83■□□□□ 0.6
RAB40C-207ENST00000563109 ANKRD22Q5VYY1 191 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 CYP2U1Q7Z449 544 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 ASB12Q8WXK4 309 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 ERP44Q9BS26 406 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 C1QTNF2Q9BXJ5 285 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 XAB2Q9HCS7 855 aaKnown RBP18.83■□□□□ 0.6
RAB40C-207ENST00000563109 PKD2L2Q9NZM6 624 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.6
RAB40C-207ENST00000563109 COQ6Q9Y2Z9 468 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 PLXNA2O75051 1894 aa18.83■□□□□ 0.6
RAB40C-207ENST00000563109 A0A1W2PPC4 97 aa18.82■□□□□ 0.6
RAB40C-207ENST00000563109 TCRBV7S3A2A0A539 114 aa18.82■□□□□ 0.6
RAB40C-207ENST00000563109 C2orf81A6NN90 581 aa18.82■□□□□ 0.6
RAB40C-207ENST00000563109 WNT9AO14904 365 aa18.82■□□□□ 0.6
RAB40C-207ENST00000563109 SLC31A1O15431 190 aa18.82■□□□□ 0.6
RAB40C-207ENST00000563109 TMEM63AO94886 807 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms