RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PCDH20Q8N6Y1 951 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 BRSK1Q8TDC3 778 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 SLC22A17Q8WUG5 538 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 HEPHQ9BQS7 1158 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DLGAP2Q9P1A6 1054 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 HECAQ9UBI9 543 aaPredicted RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 POLG2Q9UHN1 485 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 TSR3Q9UJK0 312 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 EPOP01588 193 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 PGM1P36871 562 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 HALP42357 657 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 MTHFRP42898 656 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 GLRBP48167 497 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RAP1GDS1P52306 607 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 ADAM17P78536 824 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 SH3PXD2AQ5TCZ1 1133 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 KLHDC10Q6PID8 442 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 AZIN2Q96A70 460 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 CDCA3Q99618 268 aaPredicted RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 RBBP8Q99708 897 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 GGA2Q9UJY4 613 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 ERVW-1Q9UQF0 538 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 C15orf41Q9Y2V0 281 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 TRIM64A6NGJ6 449 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TRIM64BA6NI03 449 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TPP1O14773 563 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 BGNP21810 368 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 FSHRP23945 695 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PLOD1Q02809 727 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 DSC1Q08554 894 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 SERINC3Q13530 473 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PDK4Q16654 411 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 AASDHQ4L235 1098 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 ADGRD1Q6QNK2 874 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ANKRD33Q7Z3H0 272 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ADCK2Q7Z695 626 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 UMODL1-AS1Q8N2C9 162 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 NAT8LQ8N9F0 302 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 CATSPER1Q8NEC5 780 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 AGR3Q8TD06 166 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 HDAC10Q969S8 669 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 RHOBTB2Q9BYZ6 727 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 MAN1C1Q9NR34 630 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TDP1Q9NUW8 608 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 AHSPQ9NZD4 102 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 NDUFA13Q9P0J0 144 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ARHGAP26Q9UNA1 814 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 VWA7Q9Y334 891 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PRPF4O43172 522 aaKnown RBP eCLIP7.57□□□□□ -1.2
TCF4-216ENST00000562680 ZW10O43264 779 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ANXA5P08758 320 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PABPC1P11940 636 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 AP2B1P63010 937 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PTPRNQ16849 979 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TSTD2Q5T7W7 516 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 GPSM1Q86YR5 675 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 RELL1Q8IUW5 271 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 GRIN3AQ8TCU5 1115 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 STARD8Q92502 1023 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 UBE2E3Q969T4 207 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TUBGCP3Q96CW5 907 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 FAM161BQ96MY7 647 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ACTR8Q9H981 624 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ADA2Q9NZK5 511 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 FBXL21Q9UKT6 434 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 NR2E1Q9Y466 385 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 A0A1W2PRU2 124 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 SNTNA6NMZ2 147 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ENO3P13929 434 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 SPAM1P38567 509 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ARHGDIAP52565 204 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 COPAP53621 1224 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 CACNG1Q06432 222 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 KLF1Q13351 362 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 MTSS1LQ765P7 747 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ZNF598Q86UK7 904 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 STX12Q86Y82 276 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 CHPFQ8IZ52 775 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ZNF75CPQ92670 426 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 TOP1MTQ969P6 601 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 PSMG2Q969U7 264 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 B3GALT6Q96L58 329 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ZNF304Q9HCX3 659 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ZDHHC18Q9NUE0 388 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 KCNK4Q9NYG8 393 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 NENFQ9UMX5 172 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 N6AMT1Q9Y5N5 214 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 EIF4E1BA6NMX2 242 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 SLC1A6P48664 564 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 LIMK2P53671 638 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 ATXN1P54253 815 aaKnown RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 INPP5AQ14642 412 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TTMPQ5BVD1 217 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 MS4A13Q5J8X5 152 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 OTOP3Q7RTS5 596 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 CENPIQ92674 756 aaPredicted RBP7.57□□□□□ -1.2
TCF4-216ENST00000562680 PEX13Q92968 403 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 TRIM63Q969Q1 353 aa7.57□□□□□ -1.2
TCF4-216ENST00000562680 SFXN1Q9H9B4 322 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms