RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 MTG2Q9H4K7 406 aa14.33□□□□□ -0.12
CNN2-204ENST00000562075 POLR3BQ9NW08 1133 aaPredicted RBP14.33□□□□□ -0.12
CNN2-204ENST00000562075 IL36AQ9UHA7 158 aa14.33□□□□□ -0.12
CNN2-204ENST00000562075 PHTF1Q9UMS5 762 aa14.33□□□□□ -0.12
CNN2-204ENST00000562075 TMEM120BA0PK00 339 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 SPAG7O75391 227 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 ITGA2BP08514 1039 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 F7P08709 466 aaPredicted RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 KRT4P19013 534 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 SLC1A2P43004 574 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 SOX9P48436 509 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 LIMK2P53671 638 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 MPP1Q00013 466 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 DNAJC3Q13217 504 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 PTPRRQ15256 657 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 PRPF38BQ5VTL8 546 aaKnown RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 BRAT1Q6PJG6 821 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 SERPINA13PQ6UXR4 307 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 KIAA0408Q6ZU52 694 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 USP45Q70EL2 814 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 LYSMD3Q7Z3D4 306 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 PTAR1Q7Z6K3 402 aaPredicted RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 ZSWIM9Q86XI8 627 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 DENND6AQ8IWF6 608 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 LMNTD2Q8IXW0 634 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 ANKRD42Q8N9B4 389 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 OR4K2Q8NGD2 314 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 VOPP1Q96AW1 172 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 ALKBH8Q96BT7 664 aaKnown RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 SERAC1Q96JX3 654 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 KLHL32Q96NJ5 620 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 KLF6Q99612 283 aaPredicted RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 CDX2Q99626 313 aaPredicted RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 OSBPL1AQ9BXW6 950 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 NKIRAS1Q9NYS0 192 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 FBXO5Q9UKT4 447 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 SMG5Q9UPR3 1016 aaKnown RBP14.32□□□□□ -0.12
CNN2-204ENST00000562075 WASF2Q9Y6W5 498 aa14.32□□□□□ -0.12
CNN2-204ENST00000562075 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 C1orf232A0A0U1RR37 186 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 HMX2A2RU54 273 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 CCDC162PA2VCL2 907 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 GOLGA8RI6L899 631 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 LEFTY1O75610 366 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 GOT2P00505 430 aaKnown RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 PYGBP11216 843 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 BMP1P13497 986 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 HLA-EP13747 358 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 FOSL2P15408 326 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 PSMA3P25788 255 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 HNF1BP35680 557 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 ABCG1P45844 678 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 POLR2LP62875 67 aaKnown RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 CTBP1Q13363 440 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 HNRNPA1L2Q32P51 320 aaKnown RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 AFTPHQ6ULP2 937 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 TIFABQ6ZNK6 161 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 MICALCLQ6ZW33 695 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 Q7L0L9 218 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 C2CD4AQ8NCU7 369 aaPredicted RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 MDM1Q8TC05 714 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 ATXN7L3BQ96GX2 97 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 CDKN2AIPNLQ96HQ2 116 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 LRIG1Q96JA1 1093 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 P2RY13Q9BPV8 354 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 RHOJQ9H4E5 214 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 SSU72Q9NP77 194 aaKnown RBP14.31□□□□□ -0.12
CNN2-204ENST00000562075 PKP3Q9Y446 797 aa14.31□□□□□ -0.12
CNN2-204ENST00000562075 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 A0A0U1RQS6 177 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 FAM47DPA6NHR8 397 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 CD3EAPO15446 510 aaKnown RBP14.3□□□□□ -0.12
CNN2-204ENST00000562075 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■■■■□ 23.9
CNN2-204ENST00000562075 RFPL1O75677 317 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 PRNPP04156 253 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 CTSLP07711 333 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 CHN1P15882 459 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
CNN2-204ENST00000562075 HADHAP40939 763 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 CD151P48509 253 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 SERPINB8P50452 374 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 E2F5Q15329 346 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 EGFLAMQ63HQ2 1017 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 MRNIPQ6NTE8 343 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
CNN2-204ENST00000562075 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 DCLK2Q8N568 766 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 OR4L1Q8NH43 312 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 MGARPQ8TDB4 240 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 HLA-CQ95604 372 aa14.3□□□□□ -0.12
CNN2-204ENST00000562075 VPS39Q96JC1 886 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms