RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FSTL5Q8N475 847 aaPredicted RBP10.32□□□□□ -0.76
CLK3-205ENST00000561673 TEX26Q8N6G2 289 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 KCTD6Q8NC69 237 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 PCDH19Q8TAB3 1148 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 PDCD6IPQ8WUM4 868 aaKnown RBP10.32□□□□□ -0.76
CLK3-205ENST00000561673 NSMCE1Q8WV22 266 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 SCG3Q8WXD2 468 aaKnown RBP10.32□□□□□ -0.76
CLK3-205ENST00000561673 GLMNQ92990 594 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 COQ10AQ96MF6 247 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 WDR92Q96MX6 357 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 DEPDC7Q96QD5 511 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 DNAJC7Q99615 494 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 LGR4Q9BXB1 951 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 UVRAGQ9P2Y5 699 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 B4GALT6Q9UBX8 382 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 KLQ9UEF7 1012 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 DGKBQ9Y6T7 804 aa10.32□□□□□ -0.76
CLK3-205ENST00000561673 URB1O60287 2271 aaKnown RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 A0A1W2PQ67 120 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 CACNB4O00305 520 aaPredicted RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 MFSD11O43934 449 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 CPP00450 1065 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 TNFP01375 233 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 MPOP05164 745 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 HOXC4P09017 264 aaPredicted RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 ALPIP09923 528 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 ITPKBP27987 946 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 VIPR1P32241 457 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 GJC1P36383 396 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 GARSP41250 739 aaKnown RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 TAS2R40P59535 323 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 GALNT2Q10471 571 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 TRAF2Q12933 501 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 PAFAH1B3Q15102 231 aaKnown RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 PTPRRQ15256 657 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 CNGA3Q16281 694 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 RALGPS1Q5JS13 557 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 NCBP2-AS2Q69YL0 99 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 ESRP1Q6NXG1 681 aaKnown RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 GKN2Q86XP6 184 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 SDR16C5Q8N3Y7 309 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 OR56A4Q8NGH8 313 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 ATL2Q8NHH9 583 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 CTNNBL1Q8WYA6 563 aaPredicted RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 OR1E3Q8WZA6 343 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 FGF11Q92914 225 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 PDXPQ96GD0 296 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 CRELD1Q96HD1 420 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 RBM15Q96T37 977 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■■■□ 24.3
CLK3-205ENST00000561673 NT5MQ9NPB1 228 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 MRPL40Q9NQ50 206 aaKnown RBP10.31□□□□□ -0.76
CLK3-205ENST00000561673 SIRPGQ9P1W8 387 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 GULP1Q9UBP9 304 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 PADI4Q9UM07 663 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 GPR34Q9UPC5 381 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 RAI2Q9Y5P3 530 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 ACACAQ13085 2346 aa10.31□□□□□ -0.76
CLK3-205ENST00000561673 IGSF10Q6WRI0 2623 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 A0A0U1RQS6 177 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 SSU72P8A0A1W2PR75 194 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
CLK3-205ENST00000561673 TNFRSF10CO14798 259 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 MATN3O15232 486 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 CBFA2T2O43439 604 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 HEXIM1O94992 359 aaKnown RBP10.3□□□□□ -0.76
CLK3-205ENST00000561673 PGLSO95336 258 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 MAP3K6O95382 1288 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 PDHA1P08559 390 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 TMEM253P0C7T8 217 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 LHCGRP22888 699 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ACTN2P35609 894 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ETV3P41162 512 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 LSSP48449 732 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 KIAA1024LP59773 190 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ITKQ08881 620 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 TRIM14Q14142 442 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 IHHQ14623 411 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 PDK2Q15119 407 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ISXQ2M1V0 245 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 TBC1D25Q3MII6 688 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ARMC12Q5T9G4 340 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 DENND2CQ68D51 928 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 HSD11B1LQ7Z5J1 315 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 TSPAN33Q86UF1 283 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 MAP7D3Q8IWC1 876 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 PQLC3Q8N755 202 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 ARL10Q8N8L6 244 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 KYQ8NBH2 561 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
CLK3-205ENST00000561673 SLC35G2Q8TBE7 412 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 PIH1D2Q8WWB5 315 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 RAPGEF5Q92565 580 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 MAML1Q92585 1016 aa10.3□□□□□ -0.76
CLK3-205ENST00000561673 NAT6Q93015 286 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms