RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CNPY3Q9BT09 278 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 TMEM168Q9H0V1 697 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 VPS16Q9H269 839 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ATP13A3Q9H7F0 1226 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 MRPL40Q9NQ50 206 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 TENM4Q6N022 2769 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGAP42A6NI28 874 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 C9orf172C9J069 976 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 TERTO14746 1132 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 PALMO75781 387 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 CPNE6O95741 557 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 PRKCGP05129 697 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 ETV5P41161 510 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 RGRP47804 291 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 RPL7AP62424 266 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SYCP1Q15431 976 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 TMEM164Q5U3C3 297 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 CDKAL1Q5VV42 579 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 DPPA4Q7L190 304 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 TMPRSS9Q7Z410 1059 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 C17orf82Q86X59 251 aaPredicted RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 ZFAND4Q86XD8 727 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SFTPA2Q8IWL1 248 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 TSEN2Q8NCE0 465 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 MCEEQ96PE7 176 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 CYP4F12Q9HCS2 524 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 FOXJ2Q9P0K8 574 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 AKAP7Q9P0M2 348 aaPredicted RBP11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 SIK3Q9Y2K2 1263 aa11.87□□□□□ -0.51
CARMIL3-204ENST00000561354 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 B4DGG1 531 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 TRAFD1O14545 582 aaPredicted RBP11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 ZW10O43264 779 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 SUV39H1O43463 412 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 B4GAT1O43505 415 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 TPM2P07951 284 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 DESP17661 470 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 GM2AP17900 193 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 PAPOLAP51003 745 aaKnown RBP11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 MAPK10P53779 464 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 BCL2L1Q07817 233 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 NR1D2Q14995 579 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 C16orf72Q14CZ0 275 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 KRT31Q15323 416 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 TBR1Q16650 682 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 PNCKQ6P2M8 343 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 ZNF438Q7Z4V0 828 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 PIM3Q86V86 326 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 KIAA1524Q8TCG1 905 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 GPBAR1Q8TDU6 330 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 KCTD5Q9NXV2 234 aa11.86□□□□□ -0.51
CARMIL3-204ENST00000561354 PRSS38A1L453 326 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 HGSO14964 777 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 FAM87AP0C7U9 286 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 CCNB1P14635 433 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 WT1P19544 449 aaPredicted RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 AP1S1P61966 158 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 OGDHQ02218 1023 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 ACOX1Q15067 660 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 MAP9Q49MG5 647 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 VASH2Q86V25 355 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 MCOLN2Q8IZK6 566 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 GSDMCQ9BYG8 508 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 SP110Q9HB58 689 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 RDH14Q9HBH5 336 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 SEPT11Q9NVA2 429 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 TRNAU1APQ9NX07 287 aaKnown RBP11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
CARMIL3-204ENST00000561354 PCDHGA3Q9Y5H0 932 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms