RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CEACAM1P13688 526 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 EPHA8P29322 1005 aaPredicted RBP19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 PFN3P60673 137 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 WASHC5Q12768 1159 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 ZNF542PQ5EBM4 170 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 TSPAN33Q86UF1 283 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 NDUFAF2Q8N183 169 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 HTR3CQ8WXA8 447 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 ANP32BQ92688 251 aaKnown RBP19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 CAAP1Q9H8G2 361 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 KLHL8Q9P2G9 620 aaPredicted RBP19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 SPEGQ15772 3267 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 CABIN1Q9Y6J0 2220 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 SPAARA0A1B0GVQ0 90 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 MED19A0JLT2 244 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 CFAP69A5D8W1 941 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 HACD1B0YJ81 288 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 YKT6O15498 198 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 MTSS1O43312 755 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 HEXIM1O94992 359 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 HNF1BP35680 557 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 BNIP3Q12983 259 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 ARHGEF7Q14155 803 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 PCSK7Q16549 785 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 TPRG1LQ5T0D9 272 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 KDELC2Q7Z4H8 507 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 DCP2Q8IU60 420 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 RHBDD1Q8TEB9 315 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 IMP4Q96G21 291 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 MCCC1Q96RQ3 725 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 SLC25A51Q9H1U9 297 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 GLOD4Q9HC38 313 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 GPR27Q9NS67 375 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 DNAJC28Q9NX36 388 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 PCOLCE2Q9UKZ9 415 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 PPP2R2CQ9Y2T4 447 aa19.97■□□□□ 0.79
TSPAN3-210ENST00000561277 A0A0J9YYE9 177 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 F5H423 210 aaPredicted RBP19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 PRLP01236 227 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 TRBC1P01850 177 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 RBL1P28749 1068 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 GRK6P43250 576 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 RXRGP48443 463 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 THOP1P52888 689 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 SPATA22Q8NHS9 363 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 SAP25Q8TEE9 199 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 TEKT5Q96M29 485 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 ALS2CR12Q96Q35 445 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 UBP1Q9NZI7 540 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 PPIL1Q9Y3C6 166 aa19.96■□□□□ 0.79
TSPAN3-210ENST00000561277 SPTY2D1-AS1A0A0U1RR47 76 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 CAPN8A6NHC0 703 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 MT-CYBP00156 380 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 GM2AP17900 193 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 NFKB1P19838 968 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 EIF3EP60228 445 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 SIM1P81133 766 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 XRCC4Q13426 336 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 FZD2Q14332 565 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 GALNT3Q14435 633 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 INPP5AQ14642 412 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 AGERQ15109 404 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 DBX2Q6ZNG2 339 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 ZNF662Q6ZS27 426 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 PARGQ86W56 976 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 ZNF567Q8N184 647 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 PLA2G15Q8NCC3 412 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 NUS1Q96E22 293 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 OR1A2Q9Y585 309 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 GOLGA6L9A6NEM1 432 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 RBP3P10745 1247 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 CD68P34810 354 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 ETV3P41162 512 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 INAVAQ3KP66 663 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 N4BP2L1Q5TBK1 243 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 LRRC66Q68CR7 880 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 CRTC1Q6UUV9 634 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 PID1Q7Z2X4 250 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 HSD11B1LQ7Z5J1 315 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 CDKL3Q8IVW4 592 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 COQ10AQ96MF6 247 aa19.95■□□□□ 0.78
TSPAN3-210ENST00000561277 CBFA2T3O75081 653 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 PMPCBO75439 489 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 RPL26P61254 145 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 YPEL5P62699 121 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 PTK2BQ14289 1009 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 TRIP6Q15654 476 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 QPCTQ16769 361 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 SEL1L2Q5TEA6 688 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 DARS2Q6PI48 645 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 IFT43Q96FT9 208 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 VAT1Q99536 393 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 FERMT1Q9BQL6 677 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 ADGRE3Q9BY15 652 aa19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 RPL26L1Q9UNX3 145 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-210ENST00000561277 GOLGA6CA6NDK9 693 aa19.93■□□□□ 0.78
TSPAN3-210ENST00000561277 GOLGA6BA6NDN3 693 aa19.93■□□□□ 0.78
TSPAN3-210ENST00000561277 PSMD11O00231 422 aa19.93■□□□□ 0.78
TSPAN3-210ENST00000561277 KCNN4O15554 427 aa19.93■□□□□ 0.78
TSPAN3-210ENST00000561277 GOLGA6DP0CG33 693 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms