RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 GALNT3Q14435 633 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 FAXCQ5TGI0 409 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 PAPD7Q5XG87 772 aaKnown RBP10.74□□□□□ -0.69
TPM1-229ENST00000561242 RAET1GQ6H3X3 334 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 ALYREFQ86V81 257 aaKnown RBP10.74□□□□□ -0.69
TPM1-229ENST00000561242 IQCHQ86VS3 1027 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 KLHL7Q8IXQ5 586 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 NRSN1Q8IZ57 195 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 BBOF1Q8ND07 529 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 SLC35B2Q8TB61 432 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 BTN2A2Q8WVV5 523 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 SPATA16Q9BXB7 569 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 SLC13A1Q9BZW2 595 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 C10orf88Q9H8K7 445 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 MAGEE1Q9HCI5 957 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 CD248Q9HCU0 757 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 TM9SF3Q9HD45 589 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 TMEM9BQ9NQ34 198 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 BFARQ9NZS9 450 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 SAMD15Q9P1V8 674 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 RAPGEFL1Q9UHV5 662 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 ANAPC5Q9UJX4 755 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 CDV3Q9UKY7 258 aaKnown RBP10.74□□□□□ -0.69
TPM1-229ENST00000561242 F5P12259 2224 aa10.74□□□□□ -0.69
TPM1-229ENST00000561242 NEMP2A6NFY4 417 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CAPN8A6NHC0 703 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 TRAFD1O14545 582 aaPredicted RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 PPFIA2O75334 1257 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 RECQL5O94762 991 aaPredicted RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 APRTP07741 180 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 RALBP11234 206 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 TSHRP16473 764 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 COILP38432 576 aaPredicted RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 PLA2G5P39877 138 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 HADHAP40939 763 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 VPS41P49754 854 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 METAP1P53582 386 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 TERF1P54274 439 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CDH17Q12864 832 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 GPS1Q13098 491 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CALCOCO2Q13137 446 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CCDC6Q16204 474 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SKIDA1Q1XH10 827 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SEL1L3Q68CR1 1132 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ZNF449Q6P9G9 518 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SLC23A3Q6PIS1 610 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 Q6ZSR6 202 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SLC41A1Q8IVJ1 513 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 RAVER1Q8IY67 606 aaKnown RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 KIAA2013Q8IYS2 634 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CNTD1Q8N815 330 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SUMF1Q8NBK3 374 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ARRDC2Q8TBH0 407 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 GLMNQ92990 594 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 AP2M1Q96CW1 435 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ECHDC3Q96DC8 303 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 SLC6A18Q96N87 628 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 LENG8Q96PV6 779 aaPredicted RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 EDEM2Q9BV94 578 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 FAM83DQ9H4H8 585 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 CD93Q9NPY3 652 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ITM2BQ9Y287 266 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 ANKRD6Q9Y2G4 727 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 FNDC3AQ9Y2H6 1198 aaKnown RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 R3HDM2Q9Y2K5 976 aaKnown RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 UTP11Q9Y3A2 253 aaKnown RBP10.73□□□□□ -0.69
TPM1-229ENST00000561242 SLC30A1Q9Y6M5 507 aa10.73□□□□□ -0.69
TPM1-229ENST00000561242 A0A1B0GVT2 93 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 TCRBV7S2A1N4TA0A589 114 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 AREL1O15033 823 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 VILLO15195 856 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 ZW10O43264 779 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 CLDN7O95471 211 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 AGTP01019 485 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 TNFP01375 233 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 ALPIP09923 528 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 PAMP19021 973 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 LPOP22079 712 aaPredicted RBP10.72□□□□□ -0.69
TPM1-229ENST00000561242 MMP12P39900 470 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 KCNJ1P48048 391 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 PPM1FP49593 454 aaPredicted RBP10.72□□□□□ -0.69
TPM1-229ENST00000561242 PPP2CBP62714 309 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 PPP2CAP67775 309 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 CDK16Q00536 496 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 DR1Q01658 176 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 MTM1Q13496 603 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 SLC1A5Q15758 541 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 QPCTQ16769 361 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 LRRC66Q68CR7 880 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 CASC4Q6P4E1 433 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 LIPIQ6XZB0 460 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 PRR23CQ6ZRP0 262 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 NLRP9Q7RTR0 991 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 HOOK3Q86VS8 718 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms