RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OR4K2Q8NGD2 314 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 TSPAN17Q96FV3 270 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CDCA3Q99618 268 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 CEP44Q9C0F1 390 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 SFXN1Q9H9B4 322 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 PIDD1Q9HB75 910 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CATSPERZQ9NTU4 200 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 G3V2L1 256 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 WISP3O95389 354 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 SERPINE1P05121 402 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 GRK2P25098 689 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SLC26A3P40879 764 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CTSOP43234 321 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 NRIP1P48552 1158 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 STC1P52823 247 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SLC12A2P55011 1212 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CORO7P57737 925 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 IRX4P78413 519 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 STX3Q13277 289 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CBX2Q14781 532 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 RBM20Q5T481 1227 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 HECTD2Q5U5R9 776 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 FAM45BPQ6NSW5 357 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SDCCAG8Q86SQ7 713 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 CAMK1DQ8IU85 385 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 FAM45AQ8TCE6 357 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 PDCD6IPQ8WUM4 868 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 ING5Q8WYH8 240 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 RMDN2Q96LZ7 410 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 TSNARE1Q96NA8 513 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 GPR78Q96P69 363 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 TUBGCP5Q96RT8 1024 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 TCF12Q99081 682 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 TRIM55Q9BYV6 548 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 INTS10Q9NVR2 710 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 THAP1Q9NVV9 213 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 EVLQ9UI08 416 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 VWA7Q9Y334 891 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 WNT6Q9Y6F9 365 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 HELZP42694 1942 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 BPTFQ12830 3046 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 TARM1B6A8C7 271 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 KLHL2O95198 593 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 SAT1P21673 171 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 KCNA4P22459 653 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 ABL2P42684 1182 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 SNRPD1P62314 119 aaKnown RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 CCDC15Q0P6D6 951 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 C22orf39Q6P5X5 142 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 TMC5Q6UXY8 1006 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 C10orf107Q8IVU9 208 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 C12orf76Q8N812 135 aaPredicted RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
SNX1-211ENST00000560829 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 KCTD4Q8WVF5 259 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 SMIM14Q96QK8 99 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 OLFM1Q99784 485 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 NPHS2Q9NP85 383 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 ABCF3Q9NUQ8 709 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 DZANK1Q9NVP4 752 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 IL17CQ9P0M4 197 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 SLC25A13Q9UJS0 675 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 ZNF711Q9Y462 761 aa12.92□□□□□ -0.34
SNX1-211ENST00000560829 STX7O15400 261 aaKnown RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 DLDP09622 509 aaKnown RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 SBK3P0C264 359 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 SERPINA4P29622 427 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 HMGCLP35914 325 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 SUOXP51687 545 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 KPNA2P52292 529 aaKnown RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 EPHB1P54762 984 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 OVGP1Q12889 678 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 ZNF460Q14592 562 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 RAB30Q15771 203 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 ADIPOR2Q86V24 386 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 TNS4Q8IZW8 715 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 EFHBQ8N7U6 833 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 OSCP1Q8WVF1 389 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 RPL10LQ96L21 214 aaKnown RBP12.91□□□□□ -0.34
SNX1-211ENST00000560829 UBXN10Q96LJ8 280 aa12.91□□□□□ -0.34
SNX1-211ENST00000560829 NDNQ99608 321 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms