RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GIPC3Q8TF64 312 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 TSPEARQ8WU66 669 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 RAB2BQ8WUD1 216 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 OSCP1Q8WVF1 389 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 HLA-CQ95604 372 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 C18orf25Q96B23 403 aaPredicted RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 PPWD1Q96BP3 646 aaKnown RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ACSF2Q96CM8 615 aaPredicted RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ISOC1Q96CN7 298 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 TSPAN17Q96FV3 270 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 RDH12Q96NR8 316 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 CPXM1Q96SM3 734 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 CYP2S1Q96SQ9 504 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 GAD1Q99259 594 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 HNRNPABQ99729 332 aaKnown RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ACE2Q9BYF1 805 aaPredicted RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ZCWPW1Q9H0M4 648 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF385DQ9H6B1 395 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 C20orf96Q9NUD7 363 aaPredicted RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 RNF19AQ9NV58 838 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 ADA2Q9NZK5 511 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 DSEQ9UL01 958 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 SNX9Q9Y5X1 595 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 TCF20Q9UGU0 1960 aaKnown RBP8.6□□□□□ -1.03
CCDC33-209ENST00000560565 MYO16Q9Y6X6 1858 aa8.6□□□□□ -1.03
CCDC33-209ENST00000560565 TCRBV3S1A0A5B6 114 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 WDR27A2RRH5 827 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 HMX2A2RU54 273 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 H0YAE9 185 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 H3BSA7 217 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TMEM189-UBE2V1I3L0A0 370 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CFLARO15519 480 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 LYPLA1O75608 230 aaPredicted RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ITGB1P05556 798 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 LAG3P18627 525 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TFEBP19484 476 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 FASP25445 335 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SERPINB10P48595 397 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 LHX1P48742 406 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SCNN1BP51168 640 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NDST1P52848 882 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SLC12A2P55011 1212 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 USP4Q13107 963 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 MPP3Q13368 585 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TOP3AQ13472 1001 aaPredicted RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 KRR1Q13601 381 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 LSM12Q3MHD2 195 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 GLRA4Q5JXX5 417 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CLLU1OSQ5K130 101 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ARHGAP17Q68EM7 881 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NAPEPLDQ6IQ20 393 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 KCNT2Q6UVM3 1135 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 RNF111Q6ZNA4 994 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF534Q76KX8 674 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 EFL1Q7Z2Z2 1120 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 AMIGO2Q86SJ2 522 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CLVS1Q8IUQ0 354 aaPredicted RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CRYBG2Q8N1P7 616 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 GALNT4Q8N4A0 578 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 DCLK2Q8N568 766 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 AADATQ8N5Z0 425 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 PQLC3Q8N755 202 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF781Q8N8C0 355 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SNX31Q8N9S9 440 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 COLGALT1Q8NBJ5 622 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 OR2T34Q8NGX1 318 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 OR2T3Q8NH03 318 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 PCDH19Q8TAB3 1148 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SPPL3Q8TCT6 385 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CHPT1Q8WUD6 406 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TFAP2BQ92481 460 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TFAP2CQ92754 450 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 LPPQ93052 612 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 RCN3Q96D15 328 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 FEM1CQ96JP0 617 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 MAELQ96JY0 434 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TNIP3Q96KP6 325 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ZNF778Q96MU6 729 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 PKP2Q99959 881 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 MRPL9Q9BYD2 267 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 C20orf27Q9GZN8 174 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ELOVL4Q9GZR5 314 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 RHOJQ9H4E5 214 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CWH43Q9H720 699 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 ANKHQ9HCJ1 492 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 HMG20AQ9NP66 347 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NGRNQ9NPE2 291 aaKnown RBP8.59□□□□□ -1.03
CCDC33-209ENST00000560565 SMYD2Q9NRG4 433 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 TMEM216Q9P0N5 145 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 CROTQ9UKG9 612 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 STAP1Q9ULZ2 295 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 COQ6Q9Y2Z9 468 aa8.59□□□□□ -1.03
CCDC33-209ENST00000560565 NDUFAF1Q9Y375 327 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms