RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CYP1A2P05177 515 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 FYNP06241 537 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 MMEP08473 750 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 GNLYP22749 145 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 TNFRSF8P28908 595 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 UGT1A3P35503 534 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 IGFALSP35858 605 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 ACADSBP45954 432 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 UQCRFS1P47985 274 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 CDH4P55283 916 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 GSCP56915 257 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 MC1RQ01726 317 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 CDC20Q12834 499 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 C16orf72Q14CZ0 275 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 CNGA2Q16280 664 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 AMZ1Q400G9 498 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 SYPL2Q5VXT5 272 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PAPD7Q5XG87 772 aaKnown RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 RETSATQ6NUM9 610 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 ENPP7Q6UWV6 458 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PARS2Q7L3T8 475 aaKnown RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 BEND5Q7L4P6 421 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 SPRED1Q7Z699 444 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PHF13Q86YI8 300 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 DCAF4L2Q8NA75 395 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 OR52K2Q8NGK3 314 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 ZNF606Q8WXB4 792 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 CTNNBL1Q8WYA6 563 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 TSACCQ96A04 125 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 MOCOSQ96EN8 888 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 ALS2CR12Q96Q35 445 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PRMT1Q99873 361 aaKnown RBP9.38□□□□□ -0.91
SMAD3-215ENST00000560424 PRDM8Q9NQV8 689 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 DDIT4Q9NX09 232 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 LRIT1Q9P2V4 623 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 UVRAGQ9P2Y5 699 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 DNAI1Q9UI46 699 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 TP53TG5Q9Y2B4 290 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 JRKLQ9Y4A0 524 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 DUSP10Q9Y6W6 482 aa9.38□□□□□ -0.91
SMAD3-215ENST00000560424 CTAGE9A4FU28 777 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 B4DGG1 531 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 RNF103O00237 685 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 HGSO14964 777 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 NKX2-8O15522 239 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 RAD1O60671 282 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TM7SF2O76062 418 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CPNE6O95741 557 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 DDAH2O95865 285 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 FTLP02792 175 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CCL4P13236 92 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 PNLIPP16233 465 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 BRD2P25440 801 aaKnown RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CASQ1P31415 396 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 PPM1FP49593 454 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 NOMO3P69849 1222 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 EFHC2Q5JST6 749 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CAPRIN2Q6IMN6 1127 aaKnown RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 MAMDC2Q7Z304 686 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 KDELC2Q7Z4H8 507 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TAF8Q7Z7C8 310 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SLFN11Q7Z7L1 901 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SRRM1Q8IYB3 904 aaKnown RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 NRSN1Q8IZ57 195 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SYCE1Q8N0S2 351 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 LRRC57Q8N9N7 239 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 RCBTB1Q8NDN9 531 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 FAM46DQ8NEK8 389 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SLC45A3Q96JT2 553 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 NAPGQ99747 312 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 PACSIN1Q9BY11 444 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 ASPSCR1Q9BZE9 553 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CEP44Q9C0F1 390 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SEMA6CQ9H3T2 930 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 DPEP2Q9H4A9 486 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 RDH14Q9HBH5 336 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 ACP6Q9NPH0 428 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TAS2R14Q9NYV8 317 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TRIM10Q9UDY6 481 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 KLQ9UEF7 1012 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 LCMT1Q9UIC8 334 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 PNMA8BQ9ULN7 279 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-215ENST00000560424 ITM2BQ9Y287 266 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 TBC1D30Q9Y2I9 924 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 OR51B4Q9Y5P0 310 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 CAPN6Q9Y6Q1 641 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 SDK2Q58EX2 2172 aa9.37□□□□□ -0.91
SMAD3-215ENST00000560424 UTP20O75691 2785 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms