RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DUSP23Q9BVJ7 150 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 GOLPH3Q9H4A6 298 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 NT5MQ9NPB1 228 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 EVA1BQ9NVM1 165 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 RBM22Q9NW64 420 aaKnown RBP eCLIP15.24■□□□□ 0.033e-9■■■■■ 38.6
SNRPA1-210ENST00000560383 UCKL1Q9NWZ5 548 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 PHTF1Q9UMS5 762 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 ATRXP46100 2492 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 BPTFQ12830 3046 aa15.24■□□□□ 0.03
SNRPA1-210ENST00000560383 H3BM21 787 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 APOL1O14791 398 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 SCAMP1O15126 338 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 PJA2O43164 708 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 IPO7O95373 1038 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 CSF2P04141 144 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 PRKCGP05129 697 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 GP1BAP07359 652 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 CKMT1AP12532 417 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 GM2AP17900 193 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 PEX5P50542 639 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 IFI35P80217 286 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 DAB2P98082 770 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 INSM1Q01101 510 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 IHHQ14623 411 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 PDK1Q15118 436 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 IRF4Q15306 451 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 C19orf48Q6RUI8 117 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 KATNAL2Q8IYT4 538 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 ARRDC2Q8TBH0 407 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 MCCC1Q96RQ3 725 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 LGMNQ99538 433 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 IL12RB2Q99665 862 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 BRD8Q9H0E9 1235 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 HAUS2Q9NVX0 235 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 B4GALT6Q9UBX8 382 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 CLCA2Q9UQC9 943 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 COQ6Q9Y2Z9 468 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 RAI2Q9Y5P3 530 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 CSNK1G3Q9Y6M4 447 aa15.23■□□□□ 0.03
SNRPA1-210ENST00000560383 FFAR2O15552 330 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 LZTS3O60299 673 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 RECQL5O94762 991 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 CPP00450 1065 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 HLA-DQB2P05538 268 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 NFKBIAP25963 317 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 NR2C2P49116 596 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 CLDN6P56747 220 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 SEMG2Q02383 582 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 EIF2B5Q13144 721 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 PDE1CQ14123 709 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 TFDP2Q14188 446 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 PTK2BQ14289 1009 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 ARMC12Q5T9G4 340 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 ZNF548Q8NEK5 533 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 PIH1D2Q8WWB5 315 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 SCRN2Q96FV2 425 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 LACRTQ9GZZ8 138 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 DNAJC28Q9NX36 388 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 NCKIPSDQ9NZQ3 722 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 KLF15Q9UIH9 416 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 HEY1Q9Y5J3 304 aa15.22■□□□□ 0.03
SNRPA1-210ENST00000560383 KCNK1O00180 336 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 JCHAINP01591 159 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 ELFN1P0C7U0 828 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 TNNT1P13805 278 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 VIPR1P32241 457 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 DUSP3P51452 185 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 VAV2P52735 878 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 THOP1P52888 689 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 DSC2Q02487 901 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 NIPAL4Q0D2K0 466 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 MTM1Q13496 603 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 CNGA3Q16281 694 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 ODF2Q5BJF6 829 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 ZCCHC8Q6NZY4 707 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 SPOCD1Q6ZMY3 1216 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 MACC1Q6ZN28 852 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 RFX6Q8HWS3 928 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 CNTD1Q8N815 330 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 CCNYQ8ND76 341 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 EXD1Q8NHP7 514 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 SNIP1Q8TAD8 396 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 PDCD6IPQ8WUM4 868 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 LRRN4Q8WUT4 740 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 HNRNPLLQ8WVV9 542 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 TBATAQ96M53 351 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 COQ10AQ96MF6 247 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 TDRD1Q9BXT4 1180 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 CAAP1Q9H8G2 361 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 KCTD5Q9NXV2 234 aa15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 PNMA8BQ9ULN7 279 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNRPA1-210ENST00000560383 DUSP10Q9Y6W6 482 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms