RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 EXD3Q8N9H8 876 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 FUBP1Q96AE4 644 aaKnown RBP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PCDHB18PQ96TA0 734 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 SEMA3CQ99985 751 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 NLRC4Q9NPP4 1024 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 LRIT1Q9P2V4 623 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PCDHGA4Q9Y5G9 962 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 DOPEY2Q9Y3R5 2298 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 A0A1W2PQ67 120 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 PRSS38A1L453 326 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 TMEM202A6NGA9 273 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 B4DGG1 531 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 J3KR12 359 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 EEF2KO00418 725 aaKnown RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 EPHB6O15197 1021 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ARHGAP6O43182 974 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 BUB1BO60566 1050 aaPredicted RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 CPNE6O95741 557 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 MYCLP1P12525 358 aaPredicted RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ITIH1P19827 911 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 KLK7P49862 253 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 AP1S1P61966 158 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 TGIF1Q15583 401 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 KCTD16Q68DU8 428 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 DCUN1D2Q6PH85 259 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ATG14Q6ZNE5 492 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 SRLQ86TD4 932 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 PIM3Q86V86 326 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ZSWIM9Q86XI8 627 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 Q8N9G6 341 aaPredicted RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 EXTL1Q92935 676 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 GSDMCQ9BYG8 508 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 VPS16Q9H269 839 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 DPEP2Q9H4A9 486 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 SEPT11Q9NVA2 429 aaKnown RBP11.19□□□□□ -0.62
LINC02253-202ENST00000560314 AP4E1Q9UPM8 1137 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 RNF215Q9Y6U7 377 aa11.19□□□□□ -0.62
LINC02253-202ENST00000560314 BOD1L1Q8NFC6 3051 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 C9orf172C9J069 976 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 STMND1H3BQB6 276 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 TRAFD1O14545 582 aaPredicted RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PPFIA2O75334 1257 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 CCNB1P14635 433 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 GPR3P46089 330 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 RGRP47804 291 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 ATP1A2P50993 1020 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PAPOLAP51003 745 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 RENBPP51606 427 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 RPL7AP62424 266 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 ILF3Q12906 894 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 TRA2AQ13595 282 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PHF19Q5T6S3 580 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 C17orf82Q86X59 251 aaPredicted RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PAF1Q8N7H5 531 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 TSEN2Q8NCE0 465 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 NEK11Q8NG66 645 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 GPBAR1Q8TDU6 330 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 USP7Q93009 1102 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 NUS1Q96E22 293 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 CELF6Q96J87 481 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PSKH2Q96QS6 385 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 DPYSL5Q9BPU6 564 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 SLC39A8Q9C0K1 460 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 TMEM168Q9H0V1 697 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 SP110Q9HB58 689 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 CYP4F12Q9HCS2 524 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 MRPL40Q9NQ50 206 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 PHPT1Q9NRX4 125 aaPredicted RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 TRNAU1APQ9NX07 287 aaKnown RBP11.18□□□□□ -0.62
LINC02253-202ENST00000560314 FOXJ2Q9P0K8 574 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 IL17BQ9UHF5 180 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 NBASA2RRP1 2371 aa11.18□□□□□ -0.62
LINC02253-202ENST00000560314 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
LINC02253-202ENST00000560314 RHPN2P1A8MT19 583 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 LGALS16A8MUM7 142 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 SOCS5O75159 536 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 PRKCGP05129 697 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 GM2AP17900 193 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 ITGB6P18564 788 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 TEAD1P28347 426 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 HSPA9P38646 679 aaKnown RBP11.17□□□□□ -0.62
LINC02253-202ENST00000560314 ETV5P41161 510 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 MAPK10P53779 464 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 B4GALNT1Q00973 533 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 IL10RBQ08334 325 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
LINC02253-202ENST00000560314 ACOX1Q15067 660 aa11.17□□□□□ -0.62
LINC02253-202ENST00000560314 TMCO4Q5TGY1 634 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms