RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SLC14A2Q15849 920 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CNGA3Q16281 694 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TFDP3Q5H9I0 405 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ESRP1Q6NXG1 681 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 NPNTQ6UXI9 565 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 BZW1Q7L1Q6 419 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TECPR1Q7Z6L1 1165 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CACTIN-AS1Q8N1I8 211 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 LRRC57Q8N9N7 239 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CCNYQ8ND76 341 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 CNDP2Q96KP4 475 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 TDRD1Q9BXT4 1180 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 DNAJC28Q9NX36 388 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 KLK13Q9UKR3 277 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
SMAD3-213ENST00000560175 HEY1Q9Y5J3 304 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 ASXL3Q9C0F0 2248 aa13.25□□□□□ -0.29
SMAD3-213ENST00000560175 KMT2BQ9UMN6 2715 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 NPIPB15A6NHN6 443 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 KCNK1O00180 336 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 CYP2A6P11509 494 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 SPINK2P20155 84 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 TGM2P21980 687 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 TEAD1P28347 426 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 THOP1P52888 689 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 COPS2P61201 443 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 SKOR1P84550 965 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 DSC2Q02487 901 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 DPTQ07507 201 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 ZBTB17Q13105 803 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 PRKD1Q15139 912 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 PPP2R5EQ16537 467 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 CDKN3Q16667 212 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 TEX44Q53QW1 395 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 ZNF542PQ5EBM4 170 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 PLA2G15Q8NCC3 412 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 KRT35Q92764 455 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 IMP4Q96G21 291 aaKnown RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-213ENST00000560175 DUSP23Q9BVJ7 150 aa13.24□□□□□ -0.29
SMAD3-213ENST00000560175 MYLKQ15746 1914 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 LY6G6EA0A0G2JKS1 128 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 H3BM21 787 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 K7ESM1 405 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 TNFRSF10CO14798 259 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PPP1R12AO14974 1030 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 CST8O60676 142 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 IPO7O95373 1038 aaKnown RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 CKMT1AP12532 417 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 KRT10P13645 584 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 ZNF30P17039 623 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 JUNDP17535 347 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 CTNNA2P26232 953 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PTPN7P35236 360 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 HNF1BP35680 557 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 KIAA1024LP59773 190 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PTSQ03393 145 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 NFATC4Q14934 902 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PTPRRQ15256 657 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PNCKQ6P2M8 343 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 HSD11B1LQ7Z5J1 315 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 NDUFAF2Q8N183 169 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PELI3Q8N2H9 469 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 ACRBPQ8NEB7 543 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 PDCD6IPQ8WUM4 868 aaKnown RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 FUBP1Q96AE4 644 aaKnown RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 RBM41Q96IZ5 413 aaKnown RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 TEKT5Q96M29 485 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 TRIB3Q96RU7 358 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 SLC25A51Q9H1U9 297 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 SAE1Q9UBE0 346 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMAD3-213ENST00000560175 DGKBQ9Y6T7 804 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 U3KQA8 63 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
SMAD3-213ENST00000560175 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-213ENST00000560175 CCDC66A2RUB6 948 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms