RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PPM1DO15297 605 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 BUB1O43683 1085 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 KDELR3O43731 214 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 ECEL1O95672 775 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 HOXC4P09017 264 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 CCNB1P14635 433 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 RHOQP17081 205 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 COL8A1P27658 744 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 TRIM23P36406 574 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 MMP12P39900 470 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 GPR3P46089 330 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 RAB15P59190 212 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 MC1RQ01726 317 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 APBA1Q02410 837 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 SQSTM1Q13501 440 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 CRTC2Q53ET0 693 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 TCTN3Q6NUS6 607 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 TTI2Q6NXR4 508 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 SHC3Q92529 594 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 TMEM248Q9NWD8 314 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 MOSPD1Q9UJG1 213 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 SRPK3Q9UPE1 567 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 POLEQ07864 2286 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 PRSS38A1L453 326 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ZSCAN5CA6NGD5 496 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM72CH0Y354 149 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ZW10O43264 779 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 RAMP2O60895 175 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 TCN2P20062 427 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 KELP23276 732 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 SCNN1AP37088 669 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 STAT1P42224 750 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 RHOAP61586 193 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ABHD18Q0P651 414 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM102AQ5T9C2 384 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM72AQ5TYM5 149 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM72DQ6L9T8 149 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 TRIM65Q6PJ69 517 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ASB18Q6ZVZ8 466 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 HEATR4Q86WZ0 1026 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM72BQ86X60 149 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 PELI3Q8N2H9 469 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 HCAR2Q8TDS4 363 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 EXOC2Q96KP1 924 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 TEFMQ96QE5 360 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 CTRCQ99895 268 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 CRACR2AQ9BSW2 395 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 SUV39H2Q9H5I1 410 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 NOL6Q9H6R4 1146 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 LHX3Q9UBR4 397 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 KCTD3Q9Y597 815 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 ST14Q9Y5Y6 855 aa12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 MRPS18BQ9Y676 258 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-213ENST00000560127 MKRN2OSH3BPM6 223 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 RECQL5O94762 991 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 FUCA1P04066 466 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 GM2AP17900 193 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 F8A1P23610 371 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 AK4P27144 223 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 KRT9P35527 623 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 DCTP40126 519 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 GABRB2P47870 512 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 MC2RQ01718 297 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 PTK2Q05397 1052 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 RALGDSQ12967 914 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 ERAP2Q6P179 960 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 TMEM71Q6P5X7 295 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 XYLT1Q86Y38 959 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 CCDC13Q8IYE1 715 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 NAGSQ8N159 534 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 CCDC34Q96HJ3 373 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 FAM81BQ96LP2 452 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 DPYSL5Q9BPU6 564 aa12.83□□□□□ -0.36
RABGGTA-213ENST00000560127 GSDMCQ9BYG8 508 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms