RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SIX3O95343 332 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 WISP3O95389 354 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 PMLP29590 882 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CDKL1Q00532 357 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SATB1Q01826 763 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SQLEQ14534 574 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 RFTN1Q14699 578 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 POLD3Q15054 466 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 LIN52Q52LA3 116 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 FBXO48Q5FWF7 155 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 C10orf120Q5SQS8 335 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ZNF678Q5SXM1 525 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 GLB1LQ6UWU2 654 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 LRRC49Q8IUZ0 686 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CFAP52Q8N1V2 620 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 ATP6V0D2Q8N8Y2 350 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SLC45A3Q96JT2 553 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 SMIM14Q96QK8 99 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 CRISPLD1Q9H336 500 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 EML4Q9HC35 981 aaKnown RBP10.07□□□□□ -0.8
LRRC28-216ENST00000559819 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 MIA3Q5JRA6 1907 aa10.07□□□□□ -0.8
LRRC28-216ENST00000559819 PRSS51A0A1B0GVH4 220 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CCDC162PA2VCL2 907 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 C9JVG2 144 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 RAMP2O60895 175 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 GPC4O75487 556 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 OAZ2O95190 189 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PAPSS2O95340 614 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CRTAMO95727 393 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 HSPA1AP0DMV8 641 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 HSPA1BP0DMV9 641 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SLC2A3P11169 496 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CHN2P52757 468 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PRKCZQ05513 592 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 DSC1Q08554 894 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TAF10Q12962 218 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 LRP8Q14114 963 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 GRM2Q14416 872 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 MBTPS1Q14703 1052 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SLC14A2Q15849 920 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PITRM1Q5JRX3 1037 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 C6orf52Q5T4I8 152 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 NADSYN1Q6IA69 706 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TEX26Q8N6G2 289 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SLC39A3Q9BRY0 314 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SEMA6AQ9H2E6 1030 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 LOC285095A0A1B0GVY8 99 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 ARHGEF37A1IGU5 675 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 UBXN8O00124 270 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 OR6B1O95007 311 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PGM3O95394 542 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 ELNP15502 786 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CD1DP15813 335 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 IMPDH1P20839 514 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 GATMP50440 423 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FOXA1P55317 472 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 OR4D1Q15615 310 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 RARS2Q5T160 578 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CYP2R1Q6VVX0 501 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SATL1Q86VE3 508 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TICAM1Q8IUC6 712 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PTGR2Q8N8N7 351 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CNBD2Q96M20 576 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 NSMCE3Q96MG7 304 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 NSUN5Q96P11 429 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 BTBD9Q96Q07 612 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 KCNA7Q96RP8 456 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FAM192AQ9GZU8 254 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FBXO44Q9H4M3 255 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CCSER2Q9H7U1 834 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SPATS2LQ9NUQ6 558 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 POLR3BQ9NW08 1133 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 MARCH2Q9P0N8 246 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 AP4B1Q9Y6B7 739 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 IGLV3-10A0A075B6K4 115 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 A0A0D9SEW6 157 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 PRORSD1PA6NEY8 169 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 H3BMM5 538 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CD3EAPO15446 510 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 ALDOCP09972 364 aaKnown RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SMIM18P0DKX4 95 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FGFR3P22607 806 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 OR1E1P30953 314 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 KCNQ1P51787 676 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 IL10RBQ08334 325 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 SERINC3Q13530 473 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 TRIP4Q15650 581 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 CCSAPQ6IQ19 270 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-216ENST00000559819 FAM45BPQ6NSW5 357 aa10.06□□□□□ -0.8
LRRC28-216ENST00000559819 RGMBQ6NW40 437 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms