RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PHLDB2Q86SQ0 1253 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 SLC35F3Q8IY50 421 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 PYROXD2Q8N2H3 581 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 TP53I13Q8NBR0 393 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 OR2AP1Q8NGE2 309 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 SLC30A5Q8TAD4 765 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 MAPK15Q8TD08 544 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 RXFP2Q8WXD0 754 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 PPP1R16AQ96I34 528 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 VCPIP1Q96JH7 1222 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 FEM1CQ96JP0 617 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 KLHL32Q96NJ5 620 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 DEPDC7Q96QD5 511 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 LGMNQ99538 433 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP3-215ENST00000559771 LRRC61Q9BV99 259 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 DUSP23Q9BVJ7 150 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 STK33Q9BYT3 514 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 ZDHHC6Q9H6R6 413 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 USP29Q9HBJ7 922 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 BRD7Q9NPI1 651 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 RRAGDQ9NQL2 400 aaPredicted RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 DYRK4Q9NR20 520 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 SAMSN1Q9NSI8 373 aaKnown RBP5.87□□□□□ -1.47
USP3-215ENST00000559771 TMEM248Q9NWD8 314 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 OR12D3Q9UGF7 316 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 SALL4Q9UJQ4 1053 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 ZKSCAN5Q9Y2L8 839 aa5.87□□□□□ -1.47
USP3-215ENST00000559771 CPED1A4D0V7 1026 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 NEMP2A6NFY4 417 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 LMO7DNF2Z398 122 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 KRIT1O00522 736 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 NTN3O00634 580 aaPredicted RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 FPGTO14772 594 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 YY2O15391 372 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 KLK10O43240 276 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 KDELR3O43731 214 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 NOBOXO60393 691 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 MMP20O60882 483 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 UGT2B4P06133 528 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 PLEKP08567 350 aaPredicted RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 ALPPL2P10696 532 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 KRT10P13645 584 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 TSHRP16473 764 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 RFC1P35251 1148 aaPredicted RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 PTPN9P43378 593 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 RECQLP46063 649 aaPredicted RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 MAPKAPK2P49137 400 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 DUSP3P51452 185 aaPredicted RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 ADKP55263 362 aaKnown RBP5.86□□□□□ -1.47
USP3-215ENST00000559771 TMPRSS3P57727 454 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 CDR2Q01850 454 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 LY6DQ14210 128 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 CYTH1Q15438 398 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 CDO1Q16878 200 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 C3orf38Q5JPI3 329 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 ARHGAP40Q5TG30 622 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 GDPD4Q6W3E5 623 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 B3GNT8Q7Z7M8 397 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 CLEC14AQ86T13 490 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 VPS36Q86VN1 386 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 WFDC8Q8IUA0 241 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 SFTPA2Q8IWL1 248 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 PHACTR4Q8IZ21 702 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 LSMEM2Q8N112 164 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 DENND6BQ8NEG7 585 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 LMX1AQ8TE12 382 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 KCNE4Q8WWG9 221 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 RAB7BQ96AH8 199 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 WBP1Q96G27 269 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 NSMCE3Q96MG7 304 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 DPH1Q9BZG8 443 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 MAGEH1Q9H213 219 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 CLSTN2Q9H4D0 955 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 ALG2Q9H553 416 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 LHX3Q9UBR4 397 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 MFHAS1Q9Y4C4 1052 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 PAXBP1Q9Y5B6 917 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 PCDHGA8Q9Y5G5 932 aa5.86□□□□□ -1.47
USP3-215ENST00000559771 FLNBO75369 2602 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 SPENQ96T58 3664 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 A0A1W2PQM1 296 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TSPAN11A1L157 253 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 PYCARD-AS1I3L0S3 204 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 K7ENP7 123 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 MUSKO15146 869 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 RAMP2O60895 175 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 GFPT2O94808 682 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 TMCC1O94876 653 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 POP4O95707 220 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 TPM2P07951 284 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 GM2AP17900 193 aa5.85□□□□□ -1.47
USP3-215ENST00000559771 ERCC5P28715 1186 aaPredicted RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 EIF4A3P38919 411 aaKnown RBP5.85□□□□□ -1.47
USP3-215ENST00000559771 RGRP47804 291 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms