RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNX1-207ENST00000559401 ALG6Q9Y672 507 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 EPN1Q9Y6I3 576 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 LRP4O75096 1905 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 MAP1BP46821 2468 aaKnown RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 TPRP12270 2363 aaKnown RBP8.21□□□□□ -1.09
SNX1-207ENST00000559401 CPED1A4D0V7 1026 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 CFAP69A5D8W1 941 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 NPIPB15A6NHN6 443 aaPredicted RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 C3orf70A6NLC5 250 aaPredicted RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 ZNF487B1APH4 448 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 K7ESM1 405 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 HEXIM1O94992 359 aaKnown RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 RASGRP1O95267 797 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 LCA5LO95447 670 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 ANXA6P08133 673 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PDHA1P08559 390 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 MYF5P13349 255 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 JUPP14923 745 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 LHCGRP22888 699 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 KELP23276 732 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 CD86P42081 329 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PEX5P50542 639 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 BLKP51451 505 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 DUSP3P51452 185 aaPredicted RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 CLDN6P56747 220 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PPIDQ08752 370 aaKnown RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 TFDP2Q14188 446 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 NFATC4Q14934 902 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PDK1Q15118 436 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 TCEAL1Q15170 157 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 CCDC181Q5TID7 509 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 SLC9A4Q6AI14 798 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 RAET1GQ6H3X3 334 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 C11orf63Q6NUN7 778 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 SPOCD1Q6ZMY3 1216 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 B4GALNT4Q76KP1 1039 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 TMPRSS7Q7RTY8 843 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 TSPAN33Q86UF1 283 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 VSIG1Q86XK7 387 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 TPCN2Q8NHX9 752 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 GATA6Q92908 595 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 GLMNQ92990 594 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 TSACCQ96A04 125 aaPredicted RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 HAUS1Q96CS2 278 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 SCRN2Q96FV2 425 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 RBM41Q96IZ5 413 aaKnown RBP8.21□□□□□ -1.1
SNX1-207ENST00000559401 APOLD1Q96LR9 279 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 LRRC61Q9BV99 259 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 DUSP23Q9BVJ7 150 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 WDR26Q9H7D7 661 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 SYNDIG1Q9H7V2 258 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 AMACRQ9UHK6 382 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PCDHGA1Q9Y5H4 931 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 PLXNB3Q9ULL4 1909 aa8.21□□□□□ -1.1
SNX1-207ENST00000559401 A0A0A6YYK5 440 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 A0A0U1RQS6 177 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 MACROD2A1Z1Q3 448 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CAPN8A6NHC0 703 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CST8O60676 142 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ZRANB2O95218 330 aaKnown RBP eCLIP8.2□□□□□ -1.1
SNX1-207ENST00000559401 TNFP01375 233 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 SLC4A1P02730 911 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 C1SP09871 688 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CDK4P11802 303 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 TSHRP16473 764 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CES1P23141 567 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ACP1P24666 158 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ETV3P41162 512 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CDKN2BP42772 138 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 MARCKSL1P49006 195 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 HK3P52790 923 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 HADHBP55084 474 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 KIAA1024LP59773 190 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 SRP54P61011 504 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 IFI35P80217 286 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 NIPAL4Q0D2K0 466 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ZBTB17Q13105 803 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ILKQ13418 452 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 AGERQ15109 404 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PTPRRQ15256 657 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ELOCQ15369 112 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 PCSK7Q16549 785 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CDKN3Q16667 212 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 HES3Q5TGS1 186 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 LRRC66Q68CR7 880 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 ZCCHC8Q6NZY4 707 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 RAD9BQ6WBX8 426 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 Q6ZVL8 140 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 BZW1Q7L1Q6 419 aaKnown RBP8.2□□□□□ -1.1
SNX1-207ENST00000559401 KDELC2Q7Z4H8 507 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 HSD11B1LQ7Z5J1 315 aa8.2□□□□□ -1.1
SNX1-207ENST00000559401 FSTL5Q8N475 847 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms