RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 PTPN2P17706 415 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CDH2P19022 906 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 AGAP20933 346 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 EPHB2P29323 1055 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PTGER1P34995 402 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CBSP35520 551 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PIGAP37287 484 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 THPOP40225 353 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 EIF2S3P41091 472 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 PIK3CAP42336 1068 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 COMPP49747 757 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 CAMPP49913 170 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 HSD17B4P51659 736 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 TERF1P54274 439 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 MFAP4P55083 255 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 UBXN2AP68543 259 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 SORDQ00796 357 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 GHRHRQ02643 423 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 IKQ13123 557 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 OLIG2Q13516 323 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 NAE1Q13564 534 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 LPIN1Q14693 890 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 DRAP1Q14919 205 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 PCLAFQ15004 111 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ARHGEF6Q15052 776 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 DLG2Q15700 870 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 HIST2H2ACQ16777 129 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 SOWAHAQ2M3V2 549 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 EIF2S3LQ2VIR3 472 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 ALDH1L2Q3SY69 923 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 Q4G0T1 1027 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PIK3CD-AS1Q5SR53 167 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 TTC39AQ5SRH9 613 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 C6orf10Q5SRN2 563 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PLEKHS1Q5SXH7 462 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ANKRD54Q6NXT1 300 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 GLDNQ6ZMI3 551 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 SEPT14Q6ZU15 432 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PLPPR4Q7Z2D5 763 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ADGRA1Q86SQ6 560 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 IGFN1Q86VF2 1251 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ZCCHC9Q8N567 271 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 MCPH1Q8NEM0 835 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 Q8NFD4 153 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 SEMA6DQ8NFY4 1073 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ARRDC2Q8TBH0 407 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 NEK9Q8TD19 979 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 HASPINQ8TF76 798 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 IGSF8Q969P0 613 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 JAKMIP2Q96AA8 810 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 TMEM18Q96B42 140 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 RNF183Q96D59 192 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 SAT2Q96F10 170 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 FEM1CQ96JP0 617 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 GCNAQ96QF7 691 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 OR2A14Q96R47 310 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 SIGLEC11Q96RL6 698 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 APOL6Q9BWW8 343 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 IFIH1Q9BYX4 1025 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 ST6GALNAC4Q9H4F1 302 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 BPIFA1Q9NP55 256 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ZCCHC17Q9NP64 241 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 CCDC177Q9NQR7 707 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 PAPOLBQ9NRJ5 636 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 CISD1Q9NZ45 108 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 OGFRQ9NZT2 677 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 MRPL15Q9P015 296 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 C5AR2Q9P296 337 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 SEL1LQ9UBV2 794 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 NDRG3Q9UGV2 375 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 AGO2Q9UKV8 859 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 MAFFQ9ULX9 164 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CEPT1Q9Y6K0 416 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 TTBK1Q5TCY1 1321 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 CKAP5Q14008 2032 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 A0A1W2PRQ8 180 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 URADA6NGE7 173 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 TTC36A6NLP5 189 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CDRT15L2A8MXV6 281 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 KCNU1A8MYU2 1149 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZNF814B7Z6K7 855 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 I6L893 689 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 J3KR12 359 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PPP6CO00743 305 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 LDB2O43679 373 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DKC1O60832 514 aaKnown RBP eCLIP1.68□□□□□ -2.14
USP3-209ENST00000558925 DIAPH2O60879 1101 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ATG13O75143 517 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 NDUFS3O75489 264 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 SLC25A12O75746 678 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 C22orf31O95567 290 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 NTN1O95631 604 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 HSPA4LO95757 839 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PRKCGP05129 697 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 LCKP06239 509 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 APOA4P06727 396 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 G6PDP11413 515 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PCNAP12004 261 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZNF182P17025 639 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 CHRNB2P17787 502 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms