RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SMIM14Q96QK8 99 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 PCED1AQ9H1Q7 454 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 SLC25A51Q9H1U9 297 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 KDM4CQ9H3R0 1056 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 ZFR2Q9UPR6 939 aaKnown RBP15.61■□□□□ 0.09
LINC01220-201ENST00000558575 ITM2BQ9Y287 266 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.61■□□□□ 0.09
LINC01220-201ENST00000558575 TTLL3Q9Y4R7 772 aa15.61■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3DA0A087WVF3 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3IA0A087WXS9 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3EA0A087X179 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3KA0A087X1G2 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3FA6NER0 549 aaPredicted RBP15.6■□□□□ 0.09
LINC01220-201ENST00000558575 LRRC72A6NJI9 287 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3LB9A6J9 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 MTSS1O43312 755 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 AP1G1O43747 822 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 LIASO43766 372 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3HP0C7X1 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 SERPINA4P29622 427 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 CD86P42081 329 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 CCR5P51681 352 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 SEMG2Q02383 582 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 PTPRRQ15256 657 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 OASLQ15646 514 aaKnown RBP15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3GQ6DHY5 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3CQ6IPX1 549 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 BRAT1Q6PJG6 821 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 PID1Q7Z2X4 250 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 CDKL3Q8IVW4 592 aaPredicted RBP15.6■□□□□ 0.09
LINC01220-201ENST00000558575 TBC1D3Q8IZP1 549 aaPredicted RBP15.6■□□□□ 0.09
LINC01220-201ENST00000558575 LSM14AQ8ND56 463 aaKnown RBP15.6■□□□□ 0.09
LINC01220-201ENST00000558575 SPATA22Q8NHS9 363 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 PIH1D2Q8WWB5 315 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 RAB7BQ96AH8 199 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 PBKQ96KB5 322 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 OSBPL9Q96SU4 736 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 IL21RQ9HBE5 538 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 PCDH12Q9NPG4 1184 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 SMARCAL1Q9NZC9 954 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 SNX12Q9UMY4 172 aa15.6■□□□□ 0.09
LINC01220-201ENST00000558575 A0A1W2PQU0 124 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 WNT9AO14904 365 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 ZNF185O15231 689 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 KCNN4O15554 427 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 LATO43561 262 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 RNGTTO60942 597 aaKnown RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 SOCS5O75159 536 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 NEBLO76041 1014 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 FSBPO95073 299 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 PGLSO95336 258 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 NFKB1P19838 968 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 GDF10P55107 478 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 CCDC15Q0P6D6 951 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 FGL2Q14314 439 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 PAPD7Q5XG87 772 aaKnown RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 SEL1L3Q68CR1 1132 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 PRELID2Q8N945 189 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 FAM71DQ8N9W8 422 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 SETD7Q8WTS6 366 aaKnown RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 FOXJ1Q92949 421 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 RBM15Q96T37 977 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 VAT1Q99536 393 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 GORASP1Q9BQQ3 440 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 PREBQ9HCU5 417 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 EIF2B4Q9UI10 523 aaKnown RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 TRHDEQ9UKU6 1024 aa15.59■□□□□ 0.09
LINC01220-201ENST00000558575 TTC7AQ9ULT0 858 aaPredicted RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 USP9XQ93008 2570 aaPredicted RBP15.59■□□□□ 0.09
LINC01220-201ENST00000558575 TEX15Q9BXT5 2789 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 C5orf60A6NFR6 353 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 PYCARD-AS1I3L0S3 204 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 PCDH8O95206 1070 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 MT-CYBP00156 380 aaPredicted RBP15.58■□□□□ 0.08
LINC01220-201ENST00000558575 RALGDSQ12967 914 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 SNX1Q13596 522 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 CCNG2Q16589 344 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 LONRF2Q1L5Z9 754 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 ZNF284Q2VY69 593 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TMEM52BQ4KMG9 183 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TMEM259Q4ZIN3 620 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 ANKRD20A2Q5SQ80 823 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 ANKRD20A1Q5TYW2 823 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 ANKRD20A3Q5VUR7 823 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 NEK5Q6P3R8 708 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 KDELC1Q6UW63 502 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TRIM69Q86WT6 500 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 HORMAD1Q86X24 394 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 CCDC110Q8TBZ0 833 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 PDCD6IPQ8WUM4 868 aaKnown RBP15.58■□□□□ 0.08
LINC01220-201ENST00000558575 KLK6Q92876 244 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 OXNAD1Q96HP4 312 aaPredicted RBP15.58■□□□□ 0.08
LINC01220-201ENST00000558575 FCRL5Q96RD9 977 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TRIB3Q96RU7 358 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TMEM121Q9BTD3 319 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 TDRD1Q9BXT4 1180 aaKnown RBP15.58■□□□□ 0.08
LINC01220-201ENST00000558575 KLHL8Q9P2G9 620 aaPredicted RBP15.58■□□□□ 0.08
LINC01220-201ENST00000558575 CHKBQ9Y259 395 aa15.58■□□□□ 0.08
LINC01220-201ENST00000558575 PPIL1Q9Y3C6 166 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms