RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 MAGEH1Q9H213 219 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 DCLRE1BQ9H816 532 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
TPM1-210ENST00000558264 TBL1XO60907 577 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 H2AFYO75367 372 aaKnown RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 ACRP10323 421 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 GJA1P17302 382 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ATP5F1P24539 256 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 ITGB8P26012 769 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CDH13P55290 713 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ARF5P84085 180 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 NAA25Q14CX7 972 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CYTH1Q15438 398 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TBCCQ15814 346 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TSNAXIP1Q2TAA8 658 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 DNAL1Q4LDG9 190 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ATXN7L2Q5T6C5 722 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 AGAP9Q5VTM2 703 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CLEC6AQ6EIG7 209 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CXorf57Q6NSI4 855 aaKnown RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 DNAJB7Q7Z6W7 309 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ARHGAP24Q8N264 748 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ENDOVQ8N8Q3 282 aaKnown RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 TRIB3Q96RU7 358 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CATSPERZQ9NTU4 200 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 FCF1Q9Y324 198 aaKnown RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 GOLGA8CPA6NN73 597 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 H0Y626 953 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 K7ERQ8 282 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 PPP6CO00743 305 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 INSIG1O15503 277 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 KDELR3O43731 214 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 MAGEC1O60732 1142 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 RPP40O75818 363 aaKnown RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 CIB2O75838 187 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 SIX3O95343 332 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 NDST3O95803 873 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 PRLP01236 227 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 SOD2P04179 222 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 ITGAXP20702 1163 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 FMO4P31512 558 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 MSX2P35548 267 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 CYP4F8P98187 520 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TIAL1Q01085 375 aaKnown RBP eCLIP10.58□□□□□ -0.729e-7■■■□□ 18.9
TPM1-210ENST00000558264 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 ADGRF1Q5T601 910 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 KLC3Q6P597 504 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TMEM150AQ86TG1 271 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 HPS6Q86YV9 775 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 KDM1BQ8NB78 822 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 PDZD8Q8NEN9 1154 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 OR4L1Q8NH43 312 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 BRSK1Q8TDC3 778 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 PSKH2Q96QS6 385 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TTC1Q99614 292 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 TM6SF2Q9BZW4 377 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 MMADHCQ9H3L0 296 aaPredicted RBP10.58□□□□□ -0.72
TPM1-210ENST00000558264 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 OGDHLQ9ULD0 1010 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 CDYLQ9Y232 598 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 BACE2Q9Y5Z0 518 aa10.58□□□□□ -0.72
TPM1-210ENST00000558264 MICAL3Q7RTP6 2002 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 A0A1B0GVM2 712 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 TCAF2A6NFQ2 919 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 H3BMM5 538 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 CLDN11O75508 207 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ATP6AP2O75787 350 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 IPO13O94829 963 aaKnown RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 TMCC1O94876 653 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ABLIM3O94929 683 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 BAG2O95816 211 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 EFEMP2O95967 443 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 SP100P23497 879 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 PIK3R1P27986 724 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 NUDT2P50583 147 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 RAP1GDS1P52306 607 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ATXN3P54252 364 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 PFKPQ01813 784 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 SULT2A1Q06520 285 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ASPHQ12797 758 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 PPP1R3AQ16821 1122 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 TLDC1Q6P9B6 456 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 RNF168Q8IYW5 571 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 BBS5Q8N3I7 341 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 GIMAP7Q8NHV1 300 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 CMTM5Q96DZ9 223 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 CDKN2AIPNLQ96HQ2 116 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 GALPQ9UBC7 116 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 RAI2Q9Y5P3 530 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms