RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 VPS37AQ8NEZ2 397 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 STYXQ8WUJ0 223 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 ATP6V0A1Q93050 837 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 SENP7Q9BQF6 1050 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 NUDT22Q9BRQ3 303 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 SFXN1Q9H9B4 322 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 OBP2BQ9NPH6 170 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 SEMA5BQ9P283 1151 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 IL17BQ9UHF5 180 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 MAGED2Q9UNF1 606 aaPredicted RBP6.28□□□□□ -1.4
RTF1-204ENST00000558117 LRCH1Q9Y2L9 728 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 PCDHGA5Q9Y5G8 931 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 DOCK8Q8NF50 2099 aa6.28□□□□□ -1.4
RTF1-204ENST00000558117 TLN1Q9Y490 2541 aaKnown RBP6.28□□□□□ -1.4
RTF1-204ENST00000558117 ASCC3Q8N3C0 2202 aaKnown RBP6.27□□□□□ -1.4
RTF1-204ENST00000558117 CENPEQ02224 2701 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 CSMD1Q96PZ7 3565 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 MYH1P12882 1939 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 MTORP42345 2549 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 PNMA6EA0A0J9YXQ4 647 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 SMIM35A0A1B0GVV1 85 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 KCNU1A8MYU2 1149 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 CDX4O14627 284 aaPredicted RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 FFAR2O15552 330 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 CTIFO43310 598 aaKnown RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 ANXA6P08133 673 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 ZNF286BP0CG31 522 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 LAMP2P13473 410 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 GSTM5P46439 218 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 CCR3P51677 355 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 MORC3Q14149 939 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 MVPQ14764 893 aaKnown RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 WTAPQ15007 396 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 SEC23BQ15437 767 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 TWISTNBQ3B726 338 aaPredicted RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 SPOUT1Q5T280 376 aaKnown RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 ZNF813Q6ZN06 617 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 C15orf39Q6ZRI6 1047 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 ZNF527Q8NB42 609 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 OSR1Q8TAX0 266 aaPredicted RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 MCRS1Q96EZ8 462 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 HIC2Q96JB3 615 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 CWH43Q9H720 699 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 WDR6Q9NNW5 1121 aaKnown RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 HELLSQ9NRZ9 838 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 KLHL13Q9P2N7 655 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 RNF7Q9UBF6 113 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 COL5A1P20908 1838 aaPredicted RBP6.27□□□□□ -1.41
RTF1-204ENST00000558117 LCTP09848 1927 aa6.27□□□□□ -1.41
RTF1-204ENST00000558117 ABCA2Q9BZC7 2435 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 CCDC187A0A096LP49 1063 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 LNP1A1A4G5 178 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 C17orf102A2RUQ5 167 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 GOLGA6L3A6NEY3 463 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 C16orf96A6NNT2 1141 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 LGALS16A8MUM7 142 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 NDUFB10O96000 172 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 GH1P01241 217 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 STAG3L1P0CL83 205 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 NPPBP16860 134 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 IL15P40933 162 aaPredicted RBP6.26□□□□□ -1.41
RTF1-204ENST00000558117 MMP13P45452 471 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 CXCL12P48061 93 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 JAK3P52333 1124 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 KLRC3Q07444 240 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 GAB1Q13480 694 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 SPARCL1Q14515 664 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 KBTBD6Q86V97 674 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 OVCA2Q8WZ82 227 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 PRPF18Q99633 342 aaKnown RBP6.26□□□□□ -1.41
RTF1-204ENST00000558117 ADGRE3Q9BY15 652 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 ABHD10Q9NUJ1 306 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 ADD3Q9UEY8 706 aaKnown RBP6.26□□□□□ -1.41
RTF1-204ENST00000558117 PCDHB7Q9Y5E2 793 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 NAV1Q8NEY1 1877 aa6.26□□□□□ -1.41
RTF1-204ENST00000558117 NRCAMQ92823 1304 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 SPG11Q96JI7 2443 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 F5H423 210 aaPredicted RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 NPC1O15118 1278 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 DNPH1O43598 174 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 ASNA1O43681 348 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 SLC28A2O43868 658 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 PAPSS2O95340 614 aaPredicted RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 ITGA5P08648 1049 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 PDIA3P30101 505 aaKnown RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 HOXC13P31276 330 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 POU5F1BQ06416 359 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 MGAT3Q09327 533 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 GALNT1Q10472 559 aaPredicted RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 BAATQ14032 418 aaPredicted RBP6.25□□□□□ -1.41
RTF1-204ENST00000558117 ELF2Q15723 593 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 PFKFB4Q16877 469 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 ACSM6Q6P461 480 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 SLC2A7Q6PXP3 512 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 C16orf89Q6UX73 402 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 ZNF852Q6ZMS4 543 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 TPRG1Q6ZUI0 275 aa6.25□□□□□ -1.41
RTF1-204ENST00000558117 CHST3Q7LGC8 479 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms