RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LIN37Q96GY3 246 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 WDR26Q9H7D7 661 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 GCN1Q92616 2671 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 A8MX80 341 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 CDRT15L2A8MXV6 281 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.222e-19■■■□□ 18.1
SNRPA1-204ENST00000558020 TRAFD1O14545 582 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 CELA2BP08218 269 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 ITGA2BP08514 1039 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 PNLIPP16233 465 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 CDH6P55285 790 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 SLC10A7Q0GE19 358 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 TCEA2Q15560 299 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 DPYSL2Q16555 572 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 ARHGAP40Q5TG30 622 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 OGFOD3Q6PK18 319 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 LRRC49Q8IUZ0 686 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 FBXO39Q8N4B4 442 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 NPWQ8N729 165 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 PLA2G15Q8NCC3 412 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 KIAA1524Q8TCG1 905 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 PDCD6IPQ8WUM4 868 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 HSPH1Q92598 858 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 FUBP1Q96AE4 644 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 TMEM159Q96B96 161 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 NUDCD1Q96RS6 583 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 TRIM7Q9C029 511 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 LRRN3Q9H3W5 708 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 DPEP2Q9H4A9 486 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 EPB41L5Q9HCM4 733 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 CYP4F12Q9HCS2 524 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 PHPT1Q9NRX4 125 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 MOSPD1Q9UJG1 213 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 PHTF1Q9UMS5 762 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 RP1P56715 2156 aa13.65□□□□□ -0.22
SNRPA1-204ENST00000558020 SMG1Q96Q15 3661 aaKnown RBP13.65□□□□□ -0.23
SNRPA1-204ENST00000558020 PLD2O14939 933 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 CYP2A6P11509 494 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 SKILP12757 684 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 INHBCP55103 352 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 CCL7P80098 99 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 RALGDSQ12967 914 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 NR1I3Q14994 352 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 ARHGAP36Q6ZRI8 547 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 CYP4V2Q6ZWL3 525 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 CLEC14AQ86T13 490 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 ATPAF2Q8N5M1 289 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 TEKT4Q8WW24 435 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 OR1E3Q8WZA6 343 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 SYN2Q92777 582 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 IQCDQ96DY2 449 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 LRIT1Q9P2V4 623 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 PCDHGC4Q9Y5F7 938 aa13.64□□□□□ -0.23
SNRPA1-204ENST00000558020 D6RAR5 112 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 NUDT21O43809 227 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CPP00450 1065 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 JMJD7P0C870 316 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 MYCLP1P12525 358 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 AMPD1P23109 780 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CES1P23141 567 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CCKBRP32239 447 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 VIPR1P32241 457 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 MMP13P45452 471 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CFHR1Q03591 330 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 BIRC2Q13490 618 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 KRT81Q14533 505 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 HADHQ16836 314 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 SMTNL2Q2TAL5 461 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 C14orf28Q4W4Y0 310 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CCDC122Q5T0U0 273 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CERCAMQ5T4B2 595 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 CCDC81Q6ZN84 652 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 USP45Q70EL2 814 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 Q8N9G6 341 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 NUS1Q96E22 293 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 PDXPQ96GD0 296 aa13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 PRR11Q96HE9 360 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-204ENST00000558020 COQ10AQ96MF6 247 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms