RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DESP17661 470 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 PSMA2P25787 234 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 MYL5Q02045 173 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
SCFD1-224ENST00000557713 C14orf28Q4W4Y0 310 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 PNCKQ6P2M8 343 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 CYP4V2Q6ZWL3 525 aaPredicted RBP16■□□□□ 0.15
SCFD1-224ENST00000557713 SPRED1Q7Z699 444 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 JAMLQ86YT9 394 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 PELI3Q8N2H9 469 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 NPWQ8N729 165 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 EXD3Q8N9H8 876 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 CCL4L1Q8NHW4 92 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 SPOCK2Q92563 424 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 PSKH2Q96QS6 385 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
SCFD1-224ENST00000557713 CINPQ9BW66 212 aaPredicted RBP16■□□□□ 0.15
SCFD1-224ENST00000557713 LRIT1Q9P2V4 623 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 PCSK1NQ9UHG2 260 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 LOXL2Q9Y4K0 774 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 ANKRD36A6QL64 1941 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 A8MX80 341 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 DFFAO00273 331 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 DAPK3O43293 454 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 JMJD7P0C870 316 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 CDK11BP21127 795 aaKnown RBP15.99■□□□□ 0.15
SCFD1-224ENST00000557713 TNFAIP3P21580 790 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 HCAR3P49019 387 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 SCNN1BP51168 640 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 AP1S1P61966 158 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 B4GALNT1Q00973 533 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 NCAPHQ15003 741 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 LINC00303Q3SY05 128 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 SPECC1LQ69YQ0 1117 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 TMPRSS9Q7Z410 1059 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 SLITRK4Q8IW52 837 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 TP53INP2Q8IXH6 220 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 CBARPQ8N350 705 aaPredicted RBP15.99■□□□□ 0.15
SCFD1-224ENST00000557713 TMEM159Q96B96 161 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 COQ10AQ96MF6 247 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 DPEP2Q9H4A9 486 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 SP110Q9HB58 689 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 CYP4F12Q9HCS2 524 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 ANO10Q9NW15 660 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 PISDQ9UG56 409 aa15.99■□□□□ 0.15
SCFD1-224ENST00000557713 COL6A6A6NMZ7 2263 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 TMCO5BA8MYB1 307 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 B4DGG1 531 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 B4GAT1O43505 415 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 NUDT21O43809 227 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 FUCA1P04066 466 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 LIPCP11150 499 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 KRT10P13645 584 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 ITIH1P19827 911 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 MIPP30301 263 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 ETV5P41161 510 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 RENBPP51606 427 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 SRSF6Q13247 344 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 ARHGEF7Q14155 803 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 LBRQ14739 615 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 ACOX1Q15067 660 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 C17orf82Q86X59 251 aaPredicted RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 NRROSQ86YC3 692 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 PSTKQ8IV42 348 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 GPBAR1Q8TDU6 330 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 WDR26Q9H7D7 661 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 SPATS2LQ9NUQ6 558 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 CWC15Q9P013 229 aaKnown RBP15.98■□□□□ 0.15
SCFD1-224ENST00000557713 B4GALT6Q9UBX8 382 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 MYO6Q9UM54 1294 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 SCN8AQ9UQD0 1980 aa15.98■□□□□ 0.15
SCFD1-224ENST00000557713 PRAMEF33A0A0G2JMD5 474 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PRSS38A1L453 326 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 TTC24A2A3L6 582 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PDE2AO00408 941 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 TEX33O43247 280 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 ATMINO43313 823 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 HTRA2O43464 458 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PRAMEF10O60809 474 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 RNF8O76064 485 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 FGF1P05230 155 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 ZNF135P52742 658 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 DPYSQ14117 519 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 TSR1Q2NL82 804 aaKnown RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PPP6R3Q5H9R7 873 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-224ENST00000557713 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 XKR5Q6UX68 686 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 USP53Q70EK8 1073 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 LZTR1Q8N653 840 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 FNIP1Q8TF40 1166 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 SGF29Q96ES7 293 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 ZNF599Q96NL3 588 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 CMKLR1Q99788 373 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 TEX101Q9BY14 249 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 SEMA6CQ9H3T2 930 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 WDR70Q9NW82 654 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms