RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 NFKBIAP25963 317 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 PBX1P40424 430 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 CDH6P55285 790 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 UBASH3AP57075 661 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 SLC25A11Q02978 314 aaKnown RBP14.22□□□□□ -0.13
SNX6-210ENST00000557341 TLE3Q04726 772 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 OR56A4Q8NGH8 313 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
SNX6-210ENST00000557341 NSMCE1Q8WV22 266 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 FUBP1Q96AE4 644 aaKnown RBP14.22□□□□□ -0.13
SNX6-210ENST00000557341 NUDCD1Q96RS6 583 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 RBM15Q96T37 977 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNX6-210ENST00000557341 MGME1Q9BQP7 344 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 NUP85Q9BW27 656 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 WDR26Q9H7D7 661 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 PCDH18Q9HCL0 1135 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 ETNK2Q9NVF9 386 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 GULP1Q9UBP9 304 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 B4GALT6Q9UBX8 382 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 GPR34Q9UPC5 381 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 GOLGA6L19H0YKK7 550 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.13
SNX6-210ENST00000557341 MAFKO60675 156 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 PEX11BO96011 259 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 GM2AP17900 193 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 CR2P20023 1033 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 RBMS1P29558 406 aaKnown RBP14.21□□□□□ -0.13
SNX6-210ENST00000557341 PDX1P52945 283 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 ZBED6P86452 979 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 KRT81Q14533 505 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 ACOX1Q15067 660 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 RALGPS1Q5JS13 557 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 BROXQ5VW32 411 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 TXNRD3NBQ6F5E7 133 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 NYAP1Q6ZVC0 841 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 PGBD5Q8N414 524 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 OR6C4Q8NGE1 309 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 KCNE4Q8WWG9 221 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 OR1E3Q8WZA6 343 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 CCDC74AQ96AQ1 378 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 NUS1Q96E22 293 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 NAF1Q96HR8 494 aaKnown RBP14.21□□□□□ -0.13
SNX6-210ENST00000557341 BTBD6Q96KE9 485 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 FGF22Q9HCT0 170 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
SNX6-210ENST00000557341 PCDHGA8Q9Y5G5 932 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 RAI2Q9Y5P3 530 aa14.21□□□□□ -0.13
SNX6-210ENST00000557341 A0A087X0T9 212 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 TEX51A0A1B0GUA7 166 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 TTC24A2A3L6 582 aaPredicted RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 TMEM202A6NGA9 273 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 A8MX80 341 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 PDE2AO00408 941 aaPredicted RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 NTN3O00634 580 aaPredicted RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 TNFRSF10CO14798 259 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 HOXC4P09017 264 aaPredicted RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 FAM228BP0C875 321 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 VIPR1P32241 457 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 TRIM23P36406 574 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 MMP13P45452 471 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 UCNP55089 124 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 TMPRSS3P57727 454 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 MAXP61244 160 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 CXADRP78310 365 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 NFKBIBQ15653 356 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 CNGA3Q16281 694 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 MARC1Q5VT66 337 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 KCTD16Q68DU8 428 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 GPR155Q7Z3F1 870 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 WDR36Q8NI36 951 aaKnown RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 COQ10AQ96MF6 247 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 MRPL40Q9NQ50 206 aaKnown RBP14.2□□□□□ -0.14
SNX6-210ENST00000557341 KCTD5Q9NXV2 234 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 CAPN11Q9UMQ6 739 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 PCDHGC4Q9Y5F7 938 aa14.2□□□□□ -0.14
SNX6-210ENST00000557341 CCDC187A0A096LP49 1063 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 A0A1W2PNU3 283 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 PRSS38A1L453 326 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 D6RAR5 112 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 MYO1FO00160 1098 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 PSMD11O00231 422 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 CASC3O15234 703 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 HEXIM1O94992 359 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 GYPCP04921 128 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 CYP1A2P05177 515 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 CYP2A6P11509 494 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 MYCLP1P12525 358 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 MLLT3P42568 568 aaPredicted RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 TRAF2Q12933 501 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 HADHQ16836 314 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 PNCKQ6P2M8 343 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
SNX6-210ENST00000557341 USP45Q70EL2 814 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 TAF8Q7Z7C8 310 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 ARL14Q8N4G2 192 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 GPR156Q8NFN8 814 aa14.19□□□□□ -0.14
SNX6-210ENST00000557341 ZNF564Q8TBZ8 553 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms