RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	EXOC7	Q9UPT5	735 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	PLAA	Q9Y263	795 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	HS3ST3A1	Q9Y663	406 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	CSNK1G3	Q9Y6M4	447 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	SPG11	Q96JI7	2443 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	ABCA2	Q9BZC7	2435 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	ESPL1	Q14674	2120 aa		4.87	□□□□□ -1.63
SCFD1-223	ENST00000557076	ANK1	P16157	1881 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PDZD2	O15018	2839 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PMS2P1	A4D2B8	440 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076		A8MXQ7	604 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PRAMEF26	H0Y7S4	382 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	NTN3	O00634	580 aa	Predicted RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TPP1	O14773	563 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	FFAR2	O15552	330 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	RNASEH2A	O75792	299 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PIAS2	O75928	621 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PRPF6	O94906	941 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	AGFG2	O95081	481 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TNNC2	P02585	160 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TMEM191B	P0C7N4	346 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	LIPC	P11150	499 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	RALA	P11233	206 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	POLR2E	P19388	210 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	C5AR1	P21730	350 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	HOXD9	P28356	352 aa	Predicted RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	DCT	P40126	519 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TOB1	P50616	345 aa	Predicted RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ADPRH	P54922	357 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	POLE2	P56282	527 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CYP4F2	P78329	520 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	SRSF6	Q13247	344 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF177	Q13360	481 aa	Predicted RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	GNL2	Q13823	731 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ANKRD1	Q15327	319 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZRSR1	Q15695	479 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	WDR72	Q3MJ13	1102 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TMEM119	Q4V9L6	283 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CRB2	Q5IJ48	1285 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	MPP7	Q5T2T1	576 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CHST9	Q7L1S5	443 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	DSG4	Q86SJ6	1040 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	GPBP1	Q86WP2	473 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	DENND1C	Q8IV53	801 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	AHI1	Q8N157	1196 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CRYBG2	Q8N1P7	616 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	FBXO39	Q8N4B4	442 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF366	Q8N895	744 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZSWIM2	Q8NEG5	633 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZMIZ2	Q8NF64	920 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	OR5B17	Q8NGF7	314 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	SSC4D	Q8WTU2	575 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	HTR3C	Q8WXA8	447 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	SREK1	Q8WXA9	508 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TTC17	Q96AE7	1141 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ARRDC3	Q96B67	414 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TMA16	Q96EY4	203 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	SMARCD1	Q96GM5	515 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TNIP3	Q96KP6	325 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	LMF1	Q96S06	567 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	PLIN2	Q99541	437 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	SMO	Q99835	787 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	B3GNT4	Q9C0J1	378 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CDIP1	Q9H305	208 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF768	Q9H5H4	540 aa	Known RBP	4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	NMUR1	Q9HB89	426 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CLIC5	Q9NZA1	410 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	STOML2	Q9UJZ1	356 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	ATP8B3	O60423	1300 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	APC	P25054	2843 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	TMEM131	Q92545	1883 aa		4.86	□□□□□ -1.63
SCFD1-223	ENST00000557076	CKAP5	Q14008	2032 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	RP1	P56715	2156 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076		A0A087X0B3	334 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CPED1	A4D0V7	1026 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	VWA3A	A6NCI4	1184 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	WIPF3	A6NGB9	483 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF233	A6NK53	670 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076		B2RBV5	119 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	HHLA1	C9JL84	531 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KIAA0391	O15091	583 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	MDM4	O15151	490 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	SLC7A4	O43246	635 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	BEST1	O76090	585 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	DDAH2	O95865	285 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KNG1	P01042	644 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CENPB	P07199	599 aa	Predicted RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	PABPC1	P11940	636 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	WT1	P19544	449 aa	Predicted RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CD82	P27701	267 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CORO1A	P31146	461 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	DNAJA1	P31689	397 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	ATIC	P31939	592 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CSF2RB	P32927	897 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	UGT1A5	P35504	534 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	DDIT3	P35638	169 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KIF11	P52732	1056 aa		4.85	□□□□□ -1.63

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