RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 MERTKQ12866 999 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 PMS2P3Q13401 168 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 GRB7Q14451 532 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SNX17Q15036 470 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 FBXO48Q5FWF7 155 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 HECTD2Q5U5R9 776 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CHST15Q7LFX5 561 aaPredicted RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 GPR180Q86V85 440 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CMTR2Q8IYT2 770 aaKnown RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 BBS5Q8N3I7 341 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 C19orf60Q96EN9 201 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 BIRC8Q96P09 236 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 KCNA7Q96RP8 456 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ARMC1Q9NVT9 282 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MPP6Q9NZW5 540 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 OAZ3Q9UMX2 235 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ZNF510Q9Y2H8 683 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CRYL1Q9Y2S2 319 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ZNF711Q9Y462 761 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 OTOFQ9HC10 1997 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CXCL11O14625 94 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MATN3O15232 486 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 F9P00740 461 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MT-ND1P03886 318 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SMIM10L2AP0DMW4 78 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SMIM10L2BP0DMW5 78 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CAPN3P20807 821 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 IMPDH1P20839 514 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 YAP1P46937 504 aaKnown RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 MAPK10P53779 464 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SLC5A3P53794 718 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 GEMP55040 296 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MAXP61244 160 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ZBED5Q49AG3 693 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 RAB41Q5JT25 222 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 GPR107Q5VW38 600 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 KIAA0930Q6ICG6 404 aaPredicted RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 RANBP10Q6VN20 620 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CAMK1DQ8IU85 385 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SLC15A3Q8IY34 581 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 OR6P1Q8NGX9 317 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 CCDC126Q96EE4 140 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MAML3Q96JK9 1138 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 IL12RB2Q99665 862 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 NAA50Q9GZZ1 169 aaKnown RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 VTA1Q9NP79 307 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ENTPD7Q9NQZ7 604 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CMTM6Q9NX76 183 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 NEU3Q9UQ49 428 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 GIPC1O14908 333 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 ZNF189O75820 626 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 RBP1P09455 135 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 NCK1P16333 377 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 CES1P23141 567 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 BDNFP23560 247 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 WNT3AP56704 352 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 NUP107P57740 925 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ITKQ08881 620 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PPIL2Q13356 520 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ACAP2Q15057 778 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 UGT3A2Q3SY77 523 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 UNC50Q53HI1 259 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ZNF678Q5SXM1 525 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ACBD5Q5T8D3 534 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 TWF2Q6IBS0 349 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 ZNF554Q86TJ5 538 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 KLHDC8BQ8IXV7 354 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 LZTR1Q8N653 840 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 PTERQ96BW5 349 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 UBXN10Q96LJ8 280 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 NSUN5Q96P11 429 aaKnown RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 NPLQ9BXD5 320 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 CXorf21Q9HAI6 301 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PLGRKTQ9HBL7 147 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 VWA7Q9Y334 891 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 V9GYQ6 96 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 TRIP12Q14669 1992 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 BOLA2-SMG1P6H3BVE0 249 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PIP5K1BO14986 540 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 DYNC1LI2O43237 492 aaPredicted RBP11.41□□□□□ -0.58
SRP54-213ENST00000556994 TREHO43280 583 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 SUPT3HO75486 399 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 CD247P20963 164 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 MYF6P23409 242 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PGFP49763 221 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 CLCNKBP51801 687 aa11.41□□□□□ -0.58
SRP54-213ENST00000556994 PLCL1Q15111 1095 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms