RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 RALGPS2Q86X27 583 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SCN4BQ8IWT1 228 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 CCDC65Q8IXS2 484 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM132CQ8N3T6 1108 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SPEM1Q8N4L4 309 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MAB21L3Q8N8X9 362 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SLC35B2Q8TB61 432 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 BPIFB1Q8TDL5 484 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ACTRT2Q8TDY3 377 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MRPS31Q92665 395 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PSMG2Q969U7 264 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 DHX58Q96C10 678 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 FUBP3Q96I24 572 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 EPSTI1Q96J88 318 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ZFYVE19Q96K21 471 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 WDR24Q96S15 920 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MMS19Q96T76 1030 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 NEU1Q99519 415 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ZSWIM1Q9BR11 485 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 FAM213AQ9BRX8 229 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PI4K2AQ9BTU6 479 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TASP1Q9H6P5 420 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TRPC7Q9HCX4 862 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 SAMSN1Q9NSI8 373 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 RBM12Q9NTZ6 932 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 ABHD10Q9NUJ1 306 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PANK4Q9NVE7 773 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 RNF7Q9UBF6 113 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MYO6Q9UM54 1294 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 AGAP1Q9UPQ3 857 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 MTO1Q9Y2Z2 717 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 DERAQ9Y315 318 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 LUC7L2Q9Y383 392 aaKnown RBP4.13□□□□□ -1.75
ATXN3-240ENST00000556339 KNL1Q8NG31 2342 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 TICRRQ7Z2Z1 1910 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 THADAQ6YHU6 1953 aa4.13□□□□□ -1.75
ATXN3-240ENST00000556339 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PDCD11Q14690 1871 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KIF26AQ9ULI4 1882 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KNTC1P50748 2209 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 A0A1B0GTW7 788 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PVALEFA0A1B0GWK0 134 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF233A6NK53 670 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CXorf49A8MYA2 514 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 EIF3CLB5ME19 914 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KCNJ18B7U540 433 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PIRO00625 290 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 AKR1B10O60218 316 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 MOSPD3O75425 235 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ERN1O75460 977 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 FKBP9O95302 570 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PIGRP01833 764 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GYPCP04921 128 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RETP07949 1114 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PDGFRBP09619 1106 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TMEM191BP0C7N4 346 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CSH1P0DML2 217 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CSH2P0DML3 217 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RAP2AP10114 183 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 HAPLN1P10915 354 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CHRNB1P11230 501 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 POU3F2P20265 443 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 FCARP24071 287 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 PCSK1P29120 753 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 OAS2P29728 719 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ADSLP30566 484 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CASP14P31944 242 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KRT9P35527 623 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ACTN2P35609 894 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ABCG1P45844 678 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 IFNAR2P48551 515 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 LHX1P48742 406 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZBED6P86452 979 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GTF2BQ00403 316 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SATB1Q01826 763 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 MYO1EQ12965 1108 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RUNX3Q13761 415 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KCNJ12Q14500 433 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF169Q14929 603 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 KRT31Q15323 416 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 NFE2Q16621 373 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 AASDHQ4L235 1098 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GLE1Q53GS7 698 aaKnown RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 CT83Q5H943 113 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF569Q5MCW4 686 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 STXBP5Q5T5C0 1151 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SDHAF4Q5VUM1 108 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 IL31Q6EBC2 164 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ISM2Q6H9L7 571 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 FAM180AQ6UWF9 173 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 RAD9BQ6WBX8 426 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 GBP6Q6ZN66 633 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 FKBP9P1Q75LS8 142 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 ZNF720Q7Z2F6 126 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 TRAPPC11Q7Z392 1133 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 LONP2Q86WA8 852 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SFR1Q86XK3 245 aa4.12□□□□□ -1.75
ATXN3-240ENST00000556339 SPATA2LQ8IUW3 424 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-240ENST00000556339 MAML2Q8IZL2 1156 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms