RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FZD2Q14332 565 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 PPP2R5EQ16537 467 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 WSCD2Q2TBF2 565 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 NPNTQ6UXI9 565 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 MACC1Q6ZN28 852 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 USP45Q70EL2 814 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 BZW1Q7L1Q6 419 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 CCDC50Q8IVM0 306 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 RCOR2Q8IZ40 523 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 LRRC57Q8N9N7 239 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 KRT35Q92764 455 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 MCCC1Q96RQ3 725 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 IL12RB2Q99665 862 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 DESI2Q9BSY9 194 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 TDRD1Q9BXT4 1180 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 MBNL1Q9NR56 388 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 B4GALT6Q9UBX8 382 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 WASF3Q9UPY6 502 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 RAI2Q9Y5P3 530 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 DUSP10Q9Y6W6 482 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 GRID2IPA4D2P6 1211 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 H3BM21 787 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 TNFSF14O43557 240 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 CST8O60676 142 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 SDC3O75056 442 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PIAS2O75928 621 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 RECQL5O94762 991 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 HEXIM1O94992 359 aaKnown RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 JCHAINP01591 159 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 CSF2P04141 144 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 CYP2A6P11509 494 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 KRT10P13645 584 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PECAM1P16284 738 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 CTNNA2P26232 953 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 HNRNPKP61978 463 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 NIPAL4Q0D2K0 466 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 AP1B1Q10567 949 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 KIF5AQ12840 1032 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 MTM1Q13496 603 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PTK2BQ14289 1009 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PRKD1Q15139 912 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 CNGA3Q16281 694 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 TPRG1LQ5T0D9 272 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 KAZNQ674X7 775 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 KDM7AQ6ZMT4 941 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 ARRDC2Q8TBH0 407 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 KIAA1524Q8TCG1 905 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 SCRN2Q96FV2 425 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 DNAJC28Q9NX36 388 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 TOR4AQ9NXH8 423 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PPIL1Q9Y3C6 166 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PCDHA3Q9Y5H8 950 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 GOLGA4Q13439 2230 aaKnown RBP11.57□□□□□ -0.56
SLIRP-205ENST00000556310 PTPRBP23467 1997 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 AKAP13Q12802 2813 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 SPEGQ15772 3267 aa11.57□□□□□ -0.56
SLIRP-205ENST00000556310 NPIPB15A6NHN6 443 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PSMD11O00231 422 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 DKK1O94907 266 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PCCBP05166 539 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PDHA1P08559 390 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 ATXN1LP0C7T5 689 aaKnown RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 GM2AP17900 193 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 LHCGRP22888 699 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 DGKAP23743 735 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PTPN7P35236 360 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PEX5P50542 639 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 COPS2P61201 443 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 RPL26P61254 145 aaKnown RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 ADCY2Q08462 1091 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 IHHQ14623 411 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 BBS12Q6ZW61 710 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 RAB44Q7Z6P3 723 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 NDUFAF2Q8N183 169 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 EID2Q8N6I1 236 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 CNTD1Q8N815 330 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 CCDC112Q8NEF3 446 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 ZNF548Q8NEK5 533 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 PIH1D2Q8WWB5 315 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 ADAMTS14Q8WXS8 1223 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 P3H4Q92791 437 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 CNDP2Q96KP4 475 aaKnown RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 COQ10AQ96MF6 247 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 KCTD5Q9NXV2 234 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 SEPT10Q9P0V9 454 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 DNPEPQ9ULA0 475 aa11.56□□□□□ -0.56
SLIRP-205ENST00000556310 RPL26L1Q9UNX3 145 aaKnown RBP11.56□□□□□ -0.56
SLIRP-205ENST00000556310 FRYQ5TBA9 3013 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 A0A0J9YYE9 177 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 MACROD2A1Z1Q3 448 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 CAPN8A6NHC0 703 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 A8MX80 341 aa11.55□□□□□ -0.56
SLIRP-205ENST00000556310 APOC4-APOC2K7ER74 178 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms