RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 C14orf28Q4W4Y0 310 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DNAJC24Q6P3W2 148 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DPPA4Q7L190 304 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 VASH2Q86V25 355 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZFAND4Q86XD8 727 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 JAMLQ86YT9 394 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 MCOLN2Q8IZK6 566 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FAM46DQ8NEK8 389 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 OR6C4Q8NGE1 309 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PMEPA1Q969W9 287 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 COQ10AQ96MF6 247 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TMEM74Q96NL1 305 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 KCTD15Q96SI1 283 aaPredicted RBP14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 AGPAT1Q99943 283 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NCAPGQ9BPX3 1015 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CLMPQ9H6B4 373 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 STARD5Q9NSY2 213 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SPATS2LQ9NUQ6 558 aaKnown RBP14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DACH1Q9UI36 760 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TTC24A2A3L6 582 aaPredicted RBP14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TMX2-CTNND1H3BSU7 103 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TERTO14746 1132 aaKnown RBP14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TNFRSF10CO14798 259 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 WISP1O95388 367 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PEX11BO96011 259 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 XPAP23025 273 aaPredicted RBP14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TPI1P60174 286 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NFKB2Q00653 900 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NR1D2Q14995 579 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PTPRRQ15256 657 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SPECC1LQ69YQ0 1117 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ERAP2Q6P179 960 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PNCKQ6P2M8 343 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RBM43Q6ZSC3 357 aaKnown RBP14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZNF438Q7Z4V0 828 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 IRF2BP2Q7Z5L9 587 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TAF8Q7Z7C8 310 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 GPBAR1Q8TDU6 330 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SNRNP25Q9BV90 132 aaKnown RBP14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 STRADBQ9C0K7 418 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LRIT1Q9P2V4 623 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 AP4E1Q9UPM8 1137 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PCDHGA4Q9Y5G9 962 aa14.4□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PRSS38A1L453 326 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 A8MX80 341 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 B4DGG1 531 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NUDT21O43809 227 aaKnown RBP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FGF1P05230 155 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CEACAM5P06731 702 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ERCC2P18074 760 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CR2P20023 1033 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HTR7P34969 479 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MAZP56270 477 aaKnown RBP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CYP4F2P78329 520 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NSUN2Q08J23 767 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NFATC3Q12968 1075 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 MAMLD1Q13495 774 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ACAD10Q6JQN1 1059 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PATE1Q8WXA2 126 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 USP7Q93009 1102 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NUDT22Q9BRQ3 303 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 RDH14Q9HBH5 336 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 B4GALT6Q9UBX8 382 aa14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LIMA1Q9UHB6 759 aaKnown RBP14.39□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DOPEY2Q9Y3R5 2298 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ATMINO43313 823 aaPredicted RBP14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PALMO75781 387 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ITGB2P05107 769 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ELFN1P0C7U0 828 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FAM87AP0C7U9 286 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 JMJD7P0C870 316 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CCL4P13236 92 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 LHCGRP22888 699 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SERPINA4P29622 427 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 OR1D5P58170 312 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 IL10RBQ08334 325 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 SLC10A7Q0GE19 358 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 DPYSQ14117 519 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 NCAPHQ15003 741 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 CNGA3Q16281 694 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TBR1Q16650 682 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PLEKHA7Q6IQ23 1121 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 RFX8Q6ZV50 586 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 USP53Q70EK8 1073 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 ATL2Q8NHH9 583 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FUCA2Q9BTY2 467 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 TEX101Q9BY14 249 aa14.38□□□□□ -0.11
CHMP4BP1-201ENST00000556017 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms