RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TTC27Q6P3X3 843 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 KYAT3Q6YP21 454 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 ARHGAP36Q6ZRI8 547 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 KANSL1Q7Z3B3 1105 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 RAB44Q7Z6P3 723 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 NOA1Q8NC60 698 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 NETO2Q8NC67 525 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 DENND6BQ8NEG7 585 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 CCHCR1Q8TD31 782 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 HCAR2Q8TDS4 363 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 UBXN4Q92575 508 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 KLK6Q92876 244 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 SLCO2A1Q92959 643 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 FEM1CQ96JP0 617 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 ZNF599Q96NL3 588 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TSGA13Q96PP4 275 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TUBGCP5Q96RT8 1024 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 KLF6Q99612 283 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 MYOCQ99972 504 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TMEM121Q9BTD3 319 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 RAB17Q9H0T7 212 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 SP110Q9HB58 689 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 FZD3Q9NPG1 666 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 HAUS2Q9NVX0 235 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 AMACRQ9UHK6 382 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 IPO11Q9UI26 975 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 GGT7Q9UJ14 662 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 NEUROG3Q9Y4Z2 214 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 PCDHB9Q9Y5E1 797 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 RAD51BO15315 384 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 INSIG1O15503 277 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 HYAL3O43820 417 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 NEBLO76041 1014 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 PIGNO95427 931 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 PEX11BO96011 259 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 THEGLP0DJG4 465 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SPINK2P20155 84 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 CCNCP24863 283 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 RBL1P28749 1068 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 MAP1BP46821 2468 aaKnown RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 RGRP47804 291 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 KCNJ1P48048 391 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 LRRC73Q5JTD7 316 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 PRAMEF14Q5SWL7 426 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 BRAT1Q6PJG6 821 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 GATAD2AQ86YP4 633 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 JAMLQ86YT9 394 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 TP53INP2Q8IXH6 220 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SLC22A18ASQ8N1D0 253 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 FAM71DQ8N9W8 422 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 TSEN2Q8NCE0 465 aaKnown RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 OR13H1Q8NG92 308 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 HTR3CQ8WXA8 447 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 ADAMTS14Q8WXS8 1223 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 FATE1Q969F0 183 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 KLHDC7BQ96G42 594 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 ZNF641Q96N77 438 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 LENG8Q96PV6 779 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 PSKH2Q96QS6 385 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 LGMNQ99538 433 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 CINPQ9BW66 212 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SCNM1Q9BWG6 230 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SLC17A9Q9BYT1 436 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SEPT10Q9P0V9 454 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
ACTN1-215ENST00000555616 APOBEC2Q9Y235 224 aaKnown RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 UTP11Q9Y3A2 253 aaKnown RBP9.69□□□□□ -0.86
ACTN1-215ENST00000555616 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 TP53BP1Q12888 1972 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-215ENST00000555616 TMEM131Q92545 1883 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 FAM221BA6H8Z2 402 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 IGLON5A6NGN9 336 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 NEMP1O14524 444 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 NDC80O14777 642 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 MUSKO15146 869 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 MATN3O15232 486 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 TTI1O43156 1089 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 RAD51CO43502 376 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 TNFSF14O43557 240 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 MAFKO60675 156 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 IFNB1P01574 187 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 ATXN1LP0C7T5 689 aaKnown RBP9.68□□□□□ -0.86
ACTN1-215ENST00000555616 TIMP2P16035 220 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 SERPINA4P29622 427 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 HSPA9P38646 679 aaKnown RBP9.68□□□□□ -0.86
ACTN1-215ENST00000555616 MMP12P39900 470 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 CLDN2P57739 230 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 AP1S1P61966 158 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 NSUN2Q08J23 767 aaKnown RBP eCLIP9.68□□□□□ -0.86
ACTN1-215ENST00000555616 ELP6Q0PNE2 266 aa9.68□□□□□ -0.86
ACTN1-215ENST00000555616 SGCGQ13326 291 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms