RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CLPBQ9H078 707 aa24.53■■□□□ 1.52
PRKCH-216ENST00000555542 SIRPGQ9P1W8 387 aa24.53■■□□□ 1.52
PRKCH-216ENST00000555542 PHTF1Q9UMS5 762 aa24.53■■□□□ 1.52
PRKCH-216ENST00000555542 FREM2Q5SZK8 3169 aa24.53■■□□□ 1.52
PRKCH-216ENST00000555542 TNFP01375 233 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 CELA2BP08218 269 aaPredicted RBP24.52■■□□□ 1.52
PRKCH-216ENST00000555542 KELP23276 732 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 GALNT2Q10471 571 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 PAFAH1B3Q15102 231 aaKnown RBP24.52■■□□□ 1.52
PRKCH-216ENST00000555542 ASTE1Q2TB18 679 aaPredicted RBP24.52■■□□□ 1.52
PRKCH-216ENST00000555542 CRTC1Q6UUV9 634 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 GKN2Q86XP6 184 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 NUS1Q96E22 293 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 SEMA3CQ99985 751 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 ANP32EQ9BTT0 268 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 POLR1EQ9GZS1 481 aaKnown RBP24.52■■□□□ 1.52
PRKCH-216ENST00000555542 WDR26Q9H7D7 661 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 SPTLC3Q9NUV7 552 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 GULP1Q9UBP9 304 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 MOSPD1Q9UJG1 213 aa24.52■■□□□ 1.52
PRKCH-216ENST00000555542 EME2A4GXA9 379 aaPredicted RBP24.51■■□□□ 1.51
PRKCH-216ENST00000555542 GOLGA6CA6NDK9 693 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 GOLGA6BA6NDN3 693 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 CSO75390 466 aaKnown RBP24.51■■□□□ 1.51
PRKCH-216ENST00000555542 GOLGA6DP0CG33 693 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 KRT10P13645 584 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 MAN1A1P33908 653 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 KIAA1024LP59773 190 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 ARHGEF7Q14155 803 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 RTP5Q14D33 572 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 CNGA3Q16281 694 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 IFI16Q16666 785 aaKnown RBP24.51■■□□□ 1.51
PRKCH-216ENST00000555542 USP45Q70EL2 814 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 SLC35F3Q8IY50 421 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 NDUFAF2Q8N183 169 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 OR56A4Q8NGH8 313 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 NAT6Q93015 286 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 FUBP1Q96AE4 644 aaKnown RBP24.51■■□□□ 1.51
PRKCH-216ENST00000555542 PDXPQ96GD0 296 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 CHP1Q99653 195 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 SYNDIG1Q9H7V2 258 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 NHEJ1Q9H9Q4 299 aaPredicted RBP24.51■■□□□ 1.51
PRKCH-216ENST00000555542 GOLGA6AQ9NYA3 693 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 PCDHB1Q9Y5F3 818 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 CFAP47Q6ZTR5 3102 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 LRP4O75096 1905 aa24.51■■□□□ 1.51
PRKCH-216ENST00000555542 PGLSO95336 258 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 COL28A1Q2UY09 1125 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 CDCP2Q5VXM1 449 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 SLC35G2Q8TBE7 412 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 SPOCK2Q92563 424 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 ZNF830Q96NB3 372 aaPredicted RBP24.5■■□□□ 1.51
PRKCH-216ENST00000555542 PADI4Q9UM07 663 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 RAI2Q9Y5P3 530 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 ADAMTS20P59510 1910 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 DMXL2Q8TDJ6 3036 aa24.5■■□□□ 1.51
PRKCH-216ENST00000555542 LRRD1A4D1F6 860 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 BRINP1O60477 761 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 HEXIM1O94992 359 aaKnown RBP24.49■■□□□ 1.51
PRKCH-216ENST00000555542 CTPS1P17812 591 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 MX2P20592 715 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 TGM2P21980 687 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 EPHB1P54762 984 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 ODF2Q5BJF6 829 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 PNCKQ6P2M8 343 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 LVRNQ6Q4G3 990 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 NYAP1Q6ZVC0 841 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 CNGA4Q8IV77 575 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 SDR16C5Q8N3Y7 309 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 TEX26Q8N6G2 289 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 ARL10Q8N8L6 244 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 CCNYQ8ND76 341 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 TPCN2Q8NHX9 752 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.49■■□□□ 1.51
PRKCH-216ENST00000555542 COQ10AQ96MF6 247 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 RBM22Q9NW64 420 aaKnown RBP eCLIP24.49■■□□□ 1.51
PRKCH-216ENST00000555542 KCTD5Q9NXV2 234 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 GPR34Q9UPC5 381 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 ACACAQ13085 2346 aa24.49■■□□□ 1.51
PRKCH-216ENST00000555542 TMEM202A6NGA9 273 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 PDE2AO00408 941 aaPredicted RBP24.48■■□□□ 1.51
PRKCH-216ENST00000555542 MATN3O15232 486 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 USP12O75317 370 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 GM2AP17900 193 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 CCNCP24863 283 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 GBE1Q04446 702 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 PERM1Q5SV97 790 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 RHOT2Q8IXI1 618 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 OR1E3Q8WZA6 343 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 FGF22Q9HCT0 170 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 MRPL40Q9NQ50 206 aaKnown RBP24.48■■□□□ 1.51
PRKCH-216ENST00000555542 DGKBQ9Y6T7 804 aa24.48■■□□□ 1.51
PRKCH-216ENST00000555542 NPIPB15A6NHN6 443 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 AKR1B15C9JRZ8 316 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 CCNB1P14635 433 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 CA4P22748 312 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 KDELR1P24390 212 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 ACTN2P35609 894 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 ETV3P41162 512 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 DSC2Q02487 901 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms