RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DSC2Q02487 901 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 ELMSAN1Q6PJG2 1045 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 CARM1Q86X55 608 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 EXOC8Q8IYI6 725 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 PTERQ96BW5 349 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZNF597Q96LX8 424 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 PFDN4Q9NQP4 134 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 VTI1BQ9UEU0 232 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 WNT3AP56704 352 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 TBPL2Q6SJ96 375 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZC3H7AQ8IWR0 971 aaKnown RBP17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 ITFG2Q969R8 447 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 CDCA5Q96FF9 252 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 TBATAQ96M53 351 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 PNPLA3Q9NST1 481 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 MAP10Q9P2G4 905 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 IPPQ9Y573 584 aa17.1■□□□□ 0.33
PPP4R3A-208ENST00000555462 PIRO00625 290 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 NRG1Q02297 640 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 NAB1Q13506 487 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PYCR3Q53H96 274 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PERM1Q5SV97 790 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 SETD3Q86TU7 594 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 DLG3Q92796 817 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 MRPL57Q9BQC6 102 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 EFHD1Q9BUP0 239 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 RXRGP48443 463 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 ARCN1P48444 511 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 ITGADQ13349 1161 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 TIGD2Q4W5G0 525 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 CPSF7Q8N684 471 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 GABPB2Q8TAK5 448 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 C19orf60Q96EN9 201 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PRDM8Q9NQV8 689 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 COL6A2P12110 1019 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PIK3CGP48736 1102 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 CDK9P50750 372 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 FPGSQ05932 587 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 BFSP2Q13515 415 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 GALNT3Q14435 633 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 FAM187BQ17R55 369 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 HECTD2Q5U5R9 776 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 KCTD8Q6ZWB6 473 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PIWIL4Q7Z3Z4 852 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PSD4Q8NDX1 1056 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 OR2T34Q8NGX1 318 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 OR2T3Q8NH03 318 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 CCDC90BQ9GZT6 254 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 DNAJC15Q9Y5T4 150 aa17.09■□□□□ 0.33
PPP4R3A-208ENST00000555462 PTGES3LE9PB15 166 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 GPR39O43194 453 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 TBX18O95935 607 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 UGT1A1P22309 533 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 UGT1A4P22310 534 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 UGT1A3P35503 534 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 UGT1A5P35504 534 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 POLR2IP36954 125 aaKnown RBP17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 AGTR2P50052 363 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 SLC26A2P50443 739 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 PIWIL3Q7Z3Z3 882 aaKnown RBP17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 SLC15A3Q8IY34 581 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 KLHL23Q8NBE8 558 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 FCRL2Q96LA5 508 aaPredicted RBP17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 RANBP9Q96S59 729 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZFYVE28Q9HCC9 887 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 CMTM6Q9NX76 183 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 FADS3Q9Y5Q0 445 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 ARL5AQ9Y689 179 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 U3KQV3 271 aa17.08■□□□□ 0.33
PPP4R3A-208ENST00000555462 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 VCANP13611 3396 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 PAGE1O75459 146 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 PIM1P11309 404 aaPredicted RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 IL7RP16871 459 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC7A1P30825 629 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC10A7Q0GE19 358 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 LAPTM4AQ15012 233 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 BTLAQ7Z6A9 289 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 PPM1MQ96MI6 270 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 HNRNPABQ99729 332 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 KIFC1Q9BW19 673 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 CORINQ9Y5Q5 1042 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 TRIM24O15164 1050 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 APOA4P06727 396 aa17.08■□□□□ 0.32
PPP4R3A-208ENST00000555462 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms