RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 AGAP3Q96P47 875 aa12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TCEAL2Q9H3H9 227 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 OR1A2Q9Y585 309 aa12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CFAP69A5D8W1 941 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NPIPB15A6NHN6 443 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SCAMP1O15126 338 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 YKT6O15498 198 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 FFAR2O15552 330 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TNFSF14O43557 240 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SIGLEC6O43699 453 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PIAS2O75928 621 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 LDOC1O95751 146 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CSF2P04141 144 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ELFN1P0C7U0 828 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CES1P23141 567 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 VIPR1P32241 457 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CD86P42081 329 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NR2C2P49116 596 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 THOP1P52888 689 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 IFI35P80217 286 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SKOR1P84550 965 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TFDP2Q14188 446 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CNGA3Q16281 694 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 KCTD16Q68DU8 428 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ALG1LQ6GMV1 187 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HSD11B1LQ7Z5J1 315 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 MARCH9Q86YJ5 346 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ALG3Q92685 438 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SCRN2Q96FV2 425 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CNDP2Q96KP4 475 aaKnown RBP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 COQ10AQ96MF6 247 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 APOOQ9BUR5 198 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SCNM1Q9BWG6 230 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 C1QTNF7Q9BXJ2 289 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 KLK13Q9UKR3 277 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ANGPTL2Q9UKU9 493 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PACSIN2Q9UNF0 486 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PPIL1Q9Y3C6 166 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
TRAPPC6B-205ENST00000555269 A0A1W2PQ67 120 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 K7ESM1 405 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GCATO75600 419 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HEXIM1O94992 359 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PYGMP11217 842 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 JUNDP17535 347 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 LHCGRP22888 699 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CTNNA1P35221 906 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ETV3P41162 512 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 YPEL5P62699 121 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PTSQ03393 145 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 C1orf61Q13536 156 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 AGERQ15109 404 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TCEA2Q15560 299 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 FAXCQ5TGI0 409 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CRTC1Q6UUV9 634 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 Q6ZVL8 140 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RD3Q7Z3Z2 195 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RBFAQ8N0V3 343 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SPATA22Q8NHS9 363 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 P3H4Q92791 437 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 MCCC1Q96RQ3 725 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RBM15Q96T37 977 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■■□□□ 11.9
TRAPPC6B-205ENST00000555269 LGR4Q9BXB1 951 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PCDH9Q9HC56 1237 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 FTSJ1Q9UET6 329 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 AMACRQ9UHK6 382 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 APOBEC2Q9Y235 224 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
TRAPPC6B-205ENST00000555269 A0A0J9YYE9 177 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 ENC1O14682 589 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CLDN7O95471 211 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 FTCDO95954 541 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TRBC1P01850 177 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 NME1P15531 152 aaKnown RBP12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 TGM2P21980 687 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PTPN3P26045 913 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CTNNA2P26232 953 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 EPHB1P54762 984 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 CLDN6P56747 220 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 RWDD2BP57060 319 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 HNRNPKP61978 463 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 SHC2P98077 582 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 WASHC5Q12768 1159 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PTK2BQ14289 1009 aa12.43□□□□□ -0.42
TRAPPC6B-205ENST00000555269 PRKD1Q15139 912 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms