RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MRGPRX1Q96LB2 322 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 UGT1A7Q9HAW7 530 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 UGT1A10Q9HAW8 530 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 UGT1A8Q9HAW9 530 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 EBF1Q9UH73 591 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SUN2Q9UH99 717 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SOX13Q9UN79 622 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 ZNF106Q9H2Y7 1883 aaKnown RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 PLXNA2O75051 1894 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 A0A1W2PP55 124 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 TCRBV21S2A2A0A5A6 115 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 FOXO6A8MYZ6 492 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 DCXO43602 365 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 LDB2O43679 373 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 EPOP01588 193 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 NUDT17P0C025 328 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 GCAP28676 217 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CA5AP35218 305 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 EPHB1P54762 984 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 TMPRSS15P98073 1019 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SIGLEC14Q08ET2 396 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 DMWDQ09019 674 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CST6Q15828 149 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 ANKRD20A4Q4UJ75 823 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 ZNF805Q5CZA5 627 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 RALGPS1Q5JS13 557 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CEP85LQ5SZL2 805 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 STEAP4Q687X5 459 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CEP128Q6ZU80 1094 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 OR13C4Q8NGS5 318 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CLDN23Q96B33 292 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 TTC25Q96NG3 672 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 KIFC1Q9BW19 673 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 EPHX3Q9H6B9 360 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SLC8A2Q9UPR5 921 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SIT1Q9Y3P8 196 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 GPR39O43194 453 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
TDP1-211ENST00000555178 SOCS5O75159 536 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 ERVK-10P10266 1014 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 ARNTP27540 789 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 P2RY2P41231 377 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 MAPK8P45983 427 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 ARSDP51689 593 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 CNGA3Q16281 694 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 UGP2Q16851 508 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 PCID2Q5JVF3 399 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 SPDYCQ5MJ68 293 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 LYSMD3Q7Z3D4 306 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 TMEM135Q86UB9 458 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 PPHLN1Q8NEY8 458 aaKnown RBP10.79□□□□□ -0.68
TDP1-211ENST00000555178 OR13J1Q8NGT2 312 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 OR2T3Q8NH03 318 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 GSDMBQ8TAX9 411 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 HMGB4Q8WW32 186 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 SHDQ96IW2 340 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 DNAJC1Q96KC8 554 aaKnown RBP10.79□□□□□ -0.68
TDP1-211ENST00000555178 TUBGCP5Q96RT8 1024 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 ADGRE3Q9BY15 652 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 BPIFA1Q9NP55 256 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 PCDH12Q9NPG4 1184 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.79□□□□□ -0.68
TDP1-211ENST00000555178 B4GALT6Q9UBX8 382 aa10.79□□□□□ -0.68
TDP1-211ENST00000555178 ARIH1Q9Y4X5 557 aaPredicted RBP10.79□□□□□ -0.68
TDP1-211ENST00000555178 A0A087WUV0 522 aaPredicted RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 A0A0J9YYE9 177 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 FAM237BA0A1B0GVD1 139 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TSPAN11A1L157 253 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 OR51F1A6NGY5 319 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 CHURC1-FNTBB4DL54 471 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 POC1B-GALNT4F8VUJ3 575 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 FAM155BO75949 473 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 USP1O94782 785 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 CLDN7O95471 211 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TRBC1P01850 177 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 ABHD2P08910 425 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 PRSS56P0CW18 603 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 GM2AP17900 193 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 IFFO1Q0D2I5 559 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 RALGDSQ12967 914 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 PIP5KL1Q5T9C9 394 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 CRTC1Q6UUV9 634 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 GLT6D1Q7Z4J2 308 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TTC7BQ86TV6 843 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 FAM124AQ86V42 546 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TTC30BQ8N4P2 665 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 FAM160A2Q8N612 972 aaPredicted RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 TMIEQ8NEW7 156 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 TPSD1Q9BZJ3 242 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 SUDS3Q9H7L9 328 aaPredicted RBP10.78□□□□□ -0.68
TDP1-211ENST00000555178 VIPAS39Q9H9C1 493 aa10.78□□□□□ -0.68
TDP1-211ENST00000555178 PPANQ9NQ55 473 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms