RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NPLQ9BXD5 320 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 POLD4Q9HCU8 107 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 AKIP1Q9NQ31 210 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PRDM9Q9NQV7 894 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SAE1Q9UBE0 346 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SRRDQ9UH36 339 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MTF2Q9Y483 593 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ARIH1Q9Y4X5 557 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 BACE2Q9Y5Z0 518 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TYW5A2RUC4 315 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 EME2A4GXA9 379 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 FAM220BPB1ANY3 271 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 E2F3O00716 465 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 CYB561D2O14569 222 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ZBTB24O43167 697 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 XPOTO43592 962 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ABLIM3O94929 683 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ZBTB7AO95365 584 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 LTFP02788 710 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 C2P06681 752 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SLC10A3P09131 477 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MYCLP1P12525 358 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PAX7P23759 505 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 CHMP24386 653 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PSMB4P28070 264 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TYK2P29597 1187 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 BMP8BP34820 402 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 NF2P35240 595 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MAGEA8P43361 318 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 GRIA4P48058 902 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SLC6A12P48065 614 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PAPOLAP51003 745 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TMBIM6P55061 237 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 AQP5P55064 265 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 BCAR1P56945 870 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PITX1P78337 314 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SARNPP82979 210 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TGFBIQ15582 683 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 CYBRD1Q53TN4 286 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 KDM4DQ6B0I6 523 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 NADSYN1Q6IA69 706 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TXNDC11Q6PKC3 985 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 HFE2Q6ZVN8 426 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 LYSMD3Q7Z3D4 306 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 BMP8AQ7Z5Y6 402 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 GPR180Q86V85 440 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ZFAND4Q86XD8 727 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 RFX6Q8HWS3 928 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MSRB3Q8IXL7 192 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 DEFB106AQ8N104 65 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 AADATQ8N5Z0 425 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 EMC1Q8N766 993 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MINDY2Q8NBR6 621 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 OR4K2Q8NGD2 314 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SOCS4Q8WXH5 440 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 GFM2Q969S9 779 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MUL1Q969V5 352 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TESCQ96BS2 214 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 VPS39Q96JC1 886 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 FAM210AQ96ND0 272 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MCCC1Q96RQ3 725 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PPP1R16BQ96T49 567 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MECRQ9BV79 373 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 TMX4Q9H1E5 349 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 NMRAL1Q9HBL8 299 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SERHLQ9NQF3 203 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ABCC13Q9NSE7 274 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 MIOSQ9NXC5 875 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 GTSE1Q9NYZ3 720 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 IKZF3Q9UKT9 509 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ARHGAP26Q9UNA1 814 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 VPS9D1Q9Y2B5 631 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 H3BRB1 525 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 EEF2KO00418 725 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLC16A5O15375 505 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KDELR3O43731 214 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 UGDHO60701 494 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SCN2BO60939 215 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RNASEH2AO75792 299 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RECQL4O94761 1208 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 DDHD2O94830 711 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ENO2P09104 434 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CDK4P11802 303 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MYCLP12524 364 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PTPN2P17706 415 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ERCC2P18074 760 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ITIH1P19827 911 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MGAT1P26572 445 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLC5A2P31639 672 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLCO1A2P46721 670 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GEMP55040 296 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 C1QTNF8P60827 252 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 IRF9Q00978 393 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RIN1Q13671 783 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GRM3Q14832 879 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MAPRE1Q15691 268 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 INO80DQ53TQ3 878 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CTSL3PQ5NE16 218 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF618Q5T7W0 954 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 IER5LQ5T953 404 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms