RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 COL5A2P05997 1499 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LRRIQ1Q96JM4 1722 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PRD5 423 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PRF3 423 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PRM7 423 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEB16A2A368 324 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SYN3O14994 580 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC25A12O75746 678 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MYF5P13349 255 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CHMP24386 653 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ADORA2AP29274 412 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PKN2Q16513 984 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SYT12Q8IV01 421 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FRS2Q8WU20 508 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC38A3Q99624 504 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 DCP1AQ9NPI6 582 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ENTPD4Q9Y227 616 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TVP23AA6NH52 213 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 BTN3A1O00481 513 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM58BPP0C7Q3 252 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PTPRCAPQ14761 206 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 C12orf60Q5U649 245 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF627Q7L945 461 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF554Q86TJ5 538 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CDK20Q8IZL9 346 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 BPIFB1Q8TDL5 484 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SNX33Q8WV41 574 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARL5BQ96KC2 179 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CHP1Q99653 195 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KCNK1O00180 336 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PLOD3O60568 738 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PRG2P13727 222 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ANPEPP15144 967 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NCKAP1LP55160 1127 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 S100A10P60903 97 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AAGABQ6PD74 315 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TTC33Q6PID6 262 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RALGPS2Q86X27 583 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MEX3DQ86XN8 651 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FIBCD1Q8N539 461 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 OR4D6Q8NGJ1 314 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KCTD5Q9NXV2 234 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SAP18O00422 153 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PLD2O14939 933 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TYRP1P17643 537 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CORO7P57737 925 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ATP2C1P98194 919 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 STAT4Q14765 748 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF544Q6NX49 715 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 EMBQ6PCB8 327 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM151BQ6UXP7 276 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GALNT5Q7Z7M9 940 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GPR135Q8IZ08 494 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 C11orf65Q8NCR3 313 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LMX1AQ8TE12 382 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CREB3L1Q96BA8 519 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SENP8Q96LD8 212 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AGPAT1Q99943 283 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL17Q9NRX2 175 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PTGFRNQ9P2B2 879 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TUBE1Q9UJT0 475 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RPRD2Q5VT52 1461 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GCC2Q8IWJ2 1684 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RBM47A0AV96 593 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AVILO75366 819 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ODC1P11926 461 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCND1P24385 295 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TUBP50607 506 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RTP1P59025 263 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 VLDLRP98155 873 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PLGLAQ15195 96 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF658Q5TYW1 1059 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PLEKHA7Q6IQ23 1121 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM179Q6ZVK1 233 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NPRL2Q8WTW4 380 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM159Q96B96 161 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MIEF2Q96C03 454 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 HPDLQ96IR7 371 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NSL1Q96IY1 281 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 STRBPQ96SI9 672 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TGFB3P10600 412 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 BGNP21810 368 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ANKRD7Q92527 254 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SIPA1Q96FS4 1042 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SNTG1Q9NSN8 517 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL15Q9P015 296 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARL5AQ9Y689 179 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TOP2BQ02880 1626 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ADGBQ8N7X0 1667 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A0A0A6YYH2 397 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 A6NJ64 397 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SPARCP09486 303 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SRGNP10124 158 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TALDO1P37837 337 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RGS19P49795 217 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CBX3Q13185 183 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PTK7Q13308 1070 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms