RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GKP32189 559 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 MSH2P43246 934 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ARCN1P48444 511 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 SERPINB9P50453 376 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 FAM193AP78312 1265 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 PRAMEP78395 509 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 CCDC15Q0P6D6 951 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 CCINQ13939 588 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 MLF2Q15773 248 aaPredicted RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 CNGA3Q16281 694 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 UGP2Q16851 508 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ARSIQ5FYB1 569 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 AGBL2Q5U5Z8 902 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZDHHC20Q5W0Z9 365 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TRMT10BQ6PF06 316 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 ADGRD1Q6QNK2 874 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZNF852Q6ZMS4 543 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TPRG1Q6ZUI0 275 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TAOK1Q7L7X3 1001 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 GALNT7Q86SF2 657 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 SLC26A11Q86WA9 606 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 RASSF3Q86WH2 238 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZSWIM9Q86XI8 627 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 STK40Q8N2I9 435 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 SYNPOQ8N3V7 929 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TTC30BQ8N4P2 665 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZNF366Q8N895 744 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 IL17RCQ8NAC3 791 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 MDGA1Q8NFP4 955 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 OR13J1Q8NGT2 312 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 UHMK1Q8TAS1 419 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 EPS8L3Q8TE67 593 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 FAM3CQ92520 227 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 SHDQ96IW2 340 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZNF778Q96MU6 729 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 KLHL32Q96NJ5 620 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 FCRL3Q96P31 734 aaPredicted RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 FAM129BQ96TA1 746 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ACOX2Q99424 681 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 PAFAH2Q99487 392 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TRIM56Q9BRZ2 755 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 RSPH9Q9H1X1 276 aaPredicted RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 MFSD1Q9H3U5 465 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 TMBIM4Q9HC24 238 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 PRSS16Q9NQE7 514 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ARHGEF3Q9NR81 526 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 C20orf96Q9NUD7 363 aaPredicted RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 NLE1Q9NVX2 485 aaPredicted RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 TXNDC16Q9P2K2 825 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 WNT16Q9UBV4 365 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 MRPS17Q9Y2R5 130 aaKnown RBP7.67□□□□□ -1.18
TDP1-209ENST00000554180 PKP3Q9Y446 797 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 SPO11Q9Y5K1 396 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 ARL5AQ9Y689 179 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 IKBKGQ9Y6K9 419 aa7.67□□□□□ -1.18
TDP1-209ENST00000554180 C1orf232A0A0U1RR37 186 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 NPIPB15A6NHN6 443 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 SHISA7A6NL88 538 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 H0Y858 1186 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 PSMD11O00231 422 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 KPNA3O00505 521 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 RGS16O15492 202 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 SYNCRIPO60506 623 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 KRT37O76014 449 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 KRT38O76015 456 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 VAPBO95292 243 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SYF2O95926 243 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 PIRTP0C851 137 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 XPAP23025 273 aaPredicted RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 GCAP28676 217 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 VIPR1P32241 457 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 SLC8A1P32418 973 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 TIE1P35590 1138 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 HNF1BP35680 557 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 MMP12P39900 470 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 GP5P40197 560 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 ABL2P42684 1182 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 NEK3P51956 506 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 PTPN5P54829 565 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CSE1LP55060 971 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 ZBTB16Q05516 673 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 ELP6Q0PNE2 266 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 LRRC32Q14392 662 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 EFTUD2Q15029 972 aaKnown RBP eCLIP7.66□□□□□ -1.18
TDP1-209ENST00000554180 CDKN3Q16667 212 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 TNFAIP8L3Q5GJ75 292 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 EOGTQ5NDL2 527 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 TEDDM1Q5T9Z0 273 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 LGSNQ5TDP6 509 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 ESRP1Q6NXG1 681 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 ERAP2Q6P179 960 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 AFTPHQ6ULP2 937 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CES3Q6UWW8 571 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 DPPA4Q7L190 304 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 PARS2Q7L3T8 475 aaKnown RBP7.66□□□□□ -1.18
TDP1-209ENST00000554180 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
TDP1-209ENST00000554180 CTAGE3PQ8IX95 158 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms