RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 JMJD7P0C870 316 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 GIMD1P0DJR0 217 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 SKILP12757 684 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 MYF5P13349 255 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ITIH2P19823 946 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 CES1P23141 567 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ITPKBP27987 946 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 MMP13P45452 471 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 RHDQ02161 417 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ILF3Q12906 894 aaKnown RBP eCLIP10.79□□□□□ -0.68
PNN-203ENST00000554117 WSCD2Q2TBF2 565 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ARTNQ5T4W7 220 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ARMC12Q5T9G4 340 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 IGF2-ASQ6U949 168 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 JAMLQ86YT9 394 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 SPACA3Q8IXA5 215 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 FAM46DQ8NEK8 389 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 PCDH19Q8TAB3 1148 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
PNN-203ENST00000554117 TMEM159Q96B96 161 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 NUDCD1Q96RS6 583 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 NUP85Q9BW27 656 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 GSDMCQ9BYG8 508 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ISCUQ9H1K1 167 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 DPEP2Q9H4A9 486 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
PNN-203ENST00000554117 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
PNN-203ENST00000554117 SEPT10Q9P0V9 454 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 RCOR3Q9P2K3 495 aaPredicted RBP10.79□□□□□ -0.68
PNN-203ENST00000554117 KLF15Q9UIH9 416 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 PCDHGA8Q9Y5G5 932 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 DGKBQ9Y6T7 804 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 BPTFQ12830 3046 aa10.79□□□□□ -0.68
PNN-203ENST00000554117 GCATO75600 419 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 HOXC4P09017 264 aaPredicted RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 MYCLP1P12525 358 aaPredicted RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 PNLIPP16233 465 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 GLB1P16278 677 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 VIPR1P32241 457 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 INHBCP55103 352 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ZBED6P86452 979 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 FANCCQ00597 558 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 NR1I3Q14994 352 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 TCEA2Q15560 299 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 CA9Q16790 459 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ALG11Q2TAA5 492 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 TMEM164Q5U3C3 297 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 RAET1GQ6H3X3 334 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 LIPIQ6XZB0 460 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 FBXO39Q8N4B4 442 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ZSCAN1Q8NBB4 408 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 CPLX3Q8WVH0 158 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 CTNNBL1Q8WYA6 563 aaPredicted RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 SLC39A7Q92504 469 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ECHDC3Q96DC8 303 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 LIN37Q96GY3 246 aaPredicted RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 PEBP4Q96S96 227 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 RBM15Q96T37 977 aaKnown RBP eCLIP10.78□□□□□ -0.682e-7■□□□□ 8.2
PNN-203ENST00000554117 POLR1EQ9GZS1 481 aaKnown RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 CDH19Q9H159 772 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 TCEAL2Q9H3H9 227 aaPredicted RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 PRORYQ9H606 182 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 STN1Q9H668 368 aaKnown RBP10.78□□□□□ -0.68
PNN-203ENST00000554117 CYP4F12Q9HCS2 524 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 TTLL3Q9Y4R7 772 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 ENTPD2Q9Y5L3 495 aa10.78□□□□□ -0.68
PNN-203ENST00000554117 LY6G6EA0A0G2JKS1 128 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 SYCE3A1L190 88 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 RHPN2P1A8MT19 583 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 A8MX80 341 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 B4DGG1 531 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 ERVH48-1M5A8F1 160 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 DDX3XO00571 662 aaKnown RBP eCLIP10.77□□□□□ -0.69
PNN-203ENST00000554117 ATXN7O15265 892 aaPredicted RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 CBFA2T2O43439 604 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 TNFSF15O95150 251 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 PRKCGP05129 697 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 RPLP0P05388 317 aaKnown RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 ITGA2BP08514 1039 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 KRT7P08729 469 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 AMPD1P23109 780 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 GJC1P36383 396 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 TNNT3P45378 269 aaPredicted RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 NOP2P46087 812 aaKnown RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 GPR1P46091 355 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 TLE3Q04726 772 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 SLC10A7Q0GE19 358 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 DPYSQ14117 519 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 SOWAHCQ53LP3 525 aaPredicted RBP10.77□□□□□ -0.69
PNN-203ENST00000554117 PERM1Q5SV97 790 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 TPRG1LQ5T0D9 272 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 AFMIDQ63HM1 303 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 PNCKQ6P2M8 343 aa10.77□□□□□ -0.69
PNN-203ENST00000554117 CCDC81Q6ZN84 652 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms