RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 DDNO94850 711 aaPredicted RBP6.62□□□□□ -1.35
PCNX1-205ENST00000553508 PMS2P2O95744 297 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 MMP2P08253 660 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 G6PDP11413 515 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 CHATP28329 748 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 EIF2S3P41091 472 aaKnown RBP6.62□□□□□ -1.35
PCNX1-205ENST00000553508 VAMP2P63027 116 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 HIST2H2ACQ16777 129 aaPredicted RBP6.62□□□□□ -1.35
PCNX1-205ENST00000553508 TCTN1Q2MV58 587 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 AMZ1Q400G9 498 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 SGO1Q5FBB7 561 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 FAM69AQ5T7M9 428 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 LCTLQ6UWM7 567 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 Q6ZTC4 211 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
PCNX1-205ENST00000553508 IL17FQ96PD4 163 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 VEZTQ9HBM0 779 aa6.62□□□□□ -1.35
PCNX1-205ENST00000553508 ERICH3Q5RHP9 1530 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 MAGEA13PA6NCF6 341 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 SNAP23O00161 211 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 HOXC11O43248 304 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-205ENST00000553508 BUB3O43684 328 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 GPTP24298 496 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 PAFAH1B1P43034 410 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 ZNF672Q499Z4 452 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-205ENST00000553508 SLC9C2Q5TAH2 1124 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 CUZD1Q86UP6 607 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 SLC35F3Q8IY50 421 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 AGBL3Q8NEM8 1001 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 KCNS2Q9ULS6 477 aa6.61□□□□□ -1.35
PCNX1-205ENST00000553508 NUP160Q12769 1436 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 HNRNPCL2B2RXH8 293 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE7O76087 117 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 TFP02787 698 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 CYC1P08574 325 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 XBP1P17861 261 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 CD58P19256 250 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 AGAP20933 346 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 SHMT1P34896 483 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 TUBP50607 506 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE1Q13065 139 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 GAGE4Q13068 117 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 RNPS1Q15287 305 aaKnown RBP6.6□□□□□ -1.35
PCNX1-205ENST00000553508 TXNDC8Q6A555 127 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 HIST2H2BDQ6DRA6 164 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 ANKRD54Q6NXT1 300 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 DSELQ8IZU8 1212 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 ZBTB2Q8N680 514 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 RNF125Q96EQ8 232 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 CNGB3Q9NQW8 809 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 DONSONQ9NYP3 566 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 SMARCAL1Q9NZC9 954 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 PCDHAC2Q9Y5I4 1007 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 LRRFIP2Q9Y608 721 aaKnown RBP6.6□□□□□ -1.35
PCNX1-205ENST00000553508 CEP170Q5SW79 1584 aa6.6□□□□□ -1.35
PCNX1-205ENST00000553508 SHROOM2Q13796 1616 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 PRAC2D3DTV9 90 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 IRF1P10914 325 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 GNAQP50148 359 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 NLRP5P59047 1200 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 SORDQ00796 357 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 POU3F1Q03052 451 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 C2orf68Q2NKX9 166 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 EIF2S3LQ2VIR3 472 aaKnown RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 NAA35Q5VZE5 725 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 MTSS1LQ765P7 747 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 HEATR4Q86WZ0 1026 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 ESX1Q8N693 406 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 POC1AQ8NBT0 407 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 BEST2Q8NFU1 509 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 TANKQ92844 425 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 KLHL29Q96CT2 875 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 PABPC5Q96DU9 382 aaKnown RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 ZNF385AQ96PM9 386 aaKnown RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 PKP4Q99569 1192 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 GLIS2Q9BZE0 524 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 TKTL2Q9H0I9 626 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 GPR108Q9NPR9 543 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 PPP1R14DQ9NXH3 145 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 FBXO9Q9UK97 447 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-205ENST00000553508 ARHGAP26Q9UNA1 814 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 A4GNTQ9UNA3 340 aa6.59□□□□□ -1.35
PCNX1-205ENST00000553508 A0A0G2JPF8 293 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 HNRNPCL3B7ZW38 293 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 PLRG1O43660 514 aaKnown RBP6.58□□□□□ -1.36
PCNX1-205ENST00000553508 HNRNPCL1O60812 293 aaKnown RBP6.58□□□□□ -1.36
PCNX1-205ENST00000553508 EIF3JO75822 258 aaKnown RBP6.58□□□□□ -1.36
PCNX1-205ENST00000553508 HNRNPCL4P0DMR1 293 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 ZNF155Q12901 538 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-205ENST00000553508 OASLQ15646 514 aaKnown RBP6.58□□□□□ -1.36
PCNX1-205ENST00000553508 ATP13A5Q4VNC0 1218 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 WBP2NLQ6ICG8 309 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 UNQ6126/PRO20091Q6UXV3 157 aa6.58□□□□□ -1.36
PCNX1-205ENST00000553508 HUS1BQ8NHY5 278 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms