RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DTX3LQ8TDB6 740 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ACTRT1Q8TDG2 376 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 PIH1D2Q8WWB5 315 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 SCG3Q8WXD2 468 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 RTP4Q96DX8 246 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 CDC6Q99741 560 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 NAPGQ99747 312 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 SAE1Q9UBE0 346 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 LNP1A1A4G5 178 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 C2orf81A6NN90 581 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 E7EVH7 732 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 F8W8V4 182 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TNFRSF10CO14798 259 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC30A4O14863 429 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 FLRT2O43155 660 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 LIASO43766 372 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 MMP20O60882 483 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 HEXIM1O94992 359 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CRTAMO95727 393 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 THEGLP0DJG4 465 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ALPPL2P10696 532 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 C6P13671 934 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 MAOBP27338 520 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ABL2P42684 1182 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CTSKP43235 329 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 RXRGP48443 463 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CSNK1EP49674 416 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 SKOR1P84550 965 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 DSC2Q02487 901 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TRAF2Q12933 501 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 GRIK2Q13002 908 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ZBTB17Q13105 803 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TUBB2AQ13885 445 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 NUMA1Q14980 2115 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ACOX1Q15067 660 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF423Q2M1K9 1284 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 STPG1Q5TH74 334 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 KIAA2013Q8IYS2 634 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CNTD1Q8N815 330 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TADA1Q96BN2 335 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 RBM15Q96T37 977 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ELF4Q99607 663 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TUBB2BQ9BVA1 445 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 DUSP23Q9BVJ7 150 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 GTPBP2Q9BX10 602 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 KCNF1Q9H3M0 494 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 ZFYVE1Q9HBF4 777 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 PHPT1Q9NRX4 125 aaPredicted RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TMEM74BQ9NUR3 256 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 TRMT1Q9NXH9 659 aaKnown RBP10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 B4GALT6Q9UBX8 382 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 SNX12Q9UMY4 172 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 CHKBQ9Y259 395 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 SAR1BQ9Y6B6 198 aa10.29□□□□□ -0.76
TRAFD1-208ENST00000552890 C1orf232A0A0U1RR37 186 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 LOC285095A0A1B0GVY8 99 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 A0A1W2PR77 199 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ZW10O43264 779 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 PMPCBO75439 489 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 RECQL5O94762 991 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 CSRP1P21291 193 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 TGM1P22735 817 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 HADHAP40939 763 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 GRK6P43250 576 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 LMAN1P49257 510 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 FNTAP49354 379 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 METAP1P53582 386 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 WNT3AP56704 352 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 NXPH1P58417 271 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 DCDC1P59894 354 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 PPP2CBP62714 309 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 PPP2CAP67775 309 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ADCY2Q08462 1091 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 LLGL1Q15334 1064 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 HLA-BQ31612 363 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 SEL1L3Q68CR1 1132 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ESRP1Q6NXG1 681 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 MACC1Q6ZN28 852 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 SYDE1Q6ZW31 735 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 PTAR1Q7Z6K3 402 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 PARGQ86W56 976 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 FAM71DQ8N9W8 422 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 NETO2Q8NC67 525 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 LPCAT1Q8NF37 534 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 GLMNQ92990 594 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 NUS1Q96E22 293 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 OSBPL9Q96SU4 736 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ZSCAN5AQ9BUG6 496 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 WRAP53Q9BUR4 548 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC13A1Q9BZW2 595 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms