RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 LHX3Q9UBR4 397 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 OR12D3Q9UGF7 316 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 TMEM59LQ9UK28 342 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 PILRAQ9UKJ1 303 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 TP53TG5Q9Y2B4 290 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 MFHAS1Q9Y4C4 1052 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 TSPAN11A1L157 253 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 PRSS38A1L453 326 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 EFCAB7A8K855 629 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 PPM1DO15297 605 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 LRIG2O94898 1065 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 SMC2O95347 1197 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 ECEL1O95672 775 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 IGSF6O95976 241 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 NUDT7P0C024 238 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 RHOQP17081 205 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 AK4P27144 223 aaPredicted RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 ADRA1BP35368 520 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 KRT9P35527 623 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 RGRP47804 291 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 MAPKAPK2P49137 400 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 GEMIN4P57678 1058 aaKnown RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 RHOAP61586 193 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 PTK2Q05397 1052 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 ELP6Q0PNE2 266 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 AGERQ15109 404 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 CYTH1Q15438 398 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 CDO1Q16878 200 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 LACTB2Q53H82 288 aaPredicted RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 CAMK1DQ8IU85 385 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 ZDHHC17Q8IUH5 632 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 BMPERQ8N8U9 685 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 ZDHHC1Q8WTX9 485 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 C18orf8Q96DM3 657 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 CATSPER2Q96P56 530 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 CTRCQ99895 268 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 DDA1Q9BW61 102 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 GPN2Q9H9Y4 310 aaPredicted RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 AKAP7Q9P0M2 348 aaPredicted RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 MOSPD1Q9UJG1 213 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 HPCAL4Q9UM19 191 aa8.51□□□□□ -1.05
CDK4-213ENST00000552713 MRPS18BQ9Y676 258 aaKnown RBP8.51□□□□□ -1.05
CDK4-213ENST00000552713 IGHV1OR21-1A0A087WYE8 117 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 RHPN2P1A8MT19 583 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 A8MX80 341 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 CACNB4O00305 520 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 TNFRSF10CO14798 259 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 RAMP2O60895 175 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 SEMA7AO75326 666 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 RECQL5O94762 991 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 THRAP10827 490 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 CCNB1P14635 433 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 GNLYP22749 145 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 XPAP23025 273 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 F8A1P23610 371 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 PON1P27169 355 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 COL8A1P27658 744 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 CDH5P33151 784 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 TRIM23P36406 574 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 SCNN1AP37088 669 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ETFBP38117 255 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 NRG1Q02297 640 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 RAD51Q06609 339 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 KLRB1Q12918 225 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 STIM1Q13586 685 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ACBD5Q5T8D3 534 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 TAF3Q5VWG9 929 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 C16orf46Q6P387 395 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 LIPIQ6XZB0 460 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ZNF761Q86XN6 746 aaPredicted RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 FAM129CQ86XR2 697 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ZNF354CQ86Y25 554 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 NAGSQ8N159 534 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 PYROXD2Q8N2H3 581 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 AGBL5Q8NDL9 886 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 OR4D9Q8NGE8 314 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ATL2Q8NHH9 583 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 APOBEC4Q8WW27 367 aaKnown RBP8.5□□□□□ -1.05
CDK4-213ENST00000552713 RTP4Q96DX8 246 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 NSMCE3Q96MG7 304 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 APMAPQ9HDC9 416 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 TAAR2Q9P1P5 351 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 DNAJC12Q9UKB3 198 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 PLEKHM1Q9Y4G2 1056 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 SPTBP11277 2137 aa8.5□□□□□ -1.05
CDK4-213ENST00000552713 CCDC88CQ9P219 2028 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 DIDO1Q9BTC0 2240 aaKnown RBP8.49□□□□□ -1.05
CDK4-213ENST00000552713 A1L4Q6 167 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 A8MU76 341 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 BIN1O00499 593 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 TEX33O43247 280 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 AGFG2O95081 481 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 PDGFAP04085 211 aa8.49□□□□□ -1.05
CDK4-213ENST00000552713 CEACAM5P06731 702 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms