RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PCSK1NQ9UHG2 260 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 DAPK3O43293 454 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 HGFP14210 728 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 TNFAIP3P21580 790 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 ZFP36L1Q07352 338 aaKnown RBP21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 IL10RBQ08334 325 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 SASS6Q6UVJ0 657 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 SFTPA2Q8IWL1 248 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 FAM46DQ8NEK8 389 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 SPOCK2Q92563 424 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 LGR4Q9BXB1 951 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 TMEM168Q9H0V1 697 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 SP110Q9HB58 689 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 MYO6Q9UM54 1294 aa21.77■■□□□ 1.08
SMARCC2-210ENST00000550519 TMEM191CA6NGB0 347 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 B8ZZF3 427 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 DFFAO00273 331 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 NVLO15381 856 aaKnown RBP21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 ATMINO43313 823 aaPredicted RBP21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 HCAR3P49019 387 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 SCNN1BP51168 640 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 AP1S1P61966 158 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 HLTFQ14527 1009 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 C14orf28Q4W4Y0 310 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 JAMLQ86YT9 394 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 PSTKQ8IV42 348 aaKnown RBP21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 PELI3Q8N2H9 469 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 Q8N9G6 341 aaPredicted RBP21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 FNIP1Q8TF40 1166 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 PSKH2Q96QS6 385 aa21.76■■□□□ 1.07
SMARCC2-210ENST00000550519 TMCO5BA8MYB1 307 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 RNF8O76064 485 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 MIPP30301 263 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 RENBPP51606 427 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 STX1AQ16623 288 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 PNCKQ6P2M8 343 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 SPRED1Q7Z699 444 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 TP53INP2Q8IXH6 220 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 CCL4L1Q8NHW4 92 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 TMEM159Q96B96 161 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 TRIM7Q9C029 511 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 WDR26Q9H7D7 661 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 CYP4F12Q9HCS2 524 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 LRIT1Q9P2V4 623 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 PISDQ9UG56 409 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 SEPT3Q9UH03 358 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 LOXL2Q9Y4K0 774 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 RNF215Q9Y6U7 377 aa21.75■■□□□ 1.07
SMARCC2-210ENST00000550519 UNC13CQ8NB66 2214 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 NUDT21O43809 227 aaKnown RBP21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 PRPSAP2O60256 369 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 JMJD7P0C870 316 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 ATP1A3P13637 1013 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 ZNF135P52742 658 aaPredicted RBP21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 SLC10A7Q0GE19 358 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 DPYSQ14117 519 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 TGIF1Q15583 401 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 PPP6R3Q5H9R7 873 aaPredicted RBP21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 SPECC1LQ69YQ0 1117 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 LZTR1Q8N653 840 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 PAF1Q8N7H5 531 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 COQ10AQ96MF6 247 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 ZNF599Q96NL3 588 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 DPEP2Q9H4A9 486 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 CWC15Q9P013 229 aaKnown RBP21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 B4GALT6Q9UBX8 382 aa21.74■■□□□ 1.07
SMARCC2-210ENST00000550519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 PRSS38A1L453 326 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 A8MX80 341 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 B4DGG1 531 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 PDE2AO00408 941 aaPredicted RBP21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 TEX33O43247 280 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 HTRA2O43464 458 aaPredicted RBP21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 LRCH4O75427 683 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 LBRQ14739 615 aaKnown RBP21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 ACOX1Q15067 660 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 TSR1Q2NL82 804 aaKnown RBP21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 TMCO4Q5TGY1 634 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 TMPRSS9Q7Z410 1059 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 SLITRK4Q8IW52 837 aa21.73■■□□□ 1.07
SMARCC2-210ENST00000550519 LIPCP11150 499 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 MYCLP1P12525 358 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 GZMAP12544 262 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 ITIH1P19827 911 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 CR2P20023 1033 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 B4GALNT1Q00973 533 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 ARHGEF7Q14155 803 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 C17orf82Q86X59 251 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 CBARPQ8N350 705 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 GPBAR1Q8TDU6 330 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 MOSPD1Q9UJG1 213 aa21.72■■□□□ 1.07
SMARCC2-210ENST00000550519 ANKRD36A6QL64 1941 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 A0A1W2PQ67 120 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 TTC24A2A3L6 582 aaPredicted RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 LRRC53A6NM62 1247 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 SOCS5O75159 536 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 PEX11BO96011 259 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 FTLP02792 175 aaPredicted RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 FUCA1P04066 466 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 CCNB1P14635 433 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms