RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 IL22Q9GZX6 179 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 TSPYL1Q9H0U9 437 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 MAGEE1Q9HCI5 957 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 CD93Q9NPY3 652 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 CHRAC1Q9NRG0 131 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 FBXL12Q9NXK8 326 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
RAB5C-207ENST00000550504 B4GALT6Q9UBX8 382 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 ZC3H7BQ9UGR2 993 aaKnown RBP10.32□□□□□ -0.76
RAB5C-207ENST00000550504 PPIL1Q9Y3C6 166 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 ARL5AQ9Y689 179 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.32□□□□□ -0.76
RAB5C-207ENST00000550504 TEX264Q9Y6I9 313 aa10.32□□□□□ -0.76
RAB5C-207ENST00000550504 TRIOO75962 3097 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 C1orf232A0A0U1RR37 186 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 NEMP1O14524 444 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SPINT1O43278 529 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 LDB2O43679 373 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ERLIN1O75477 346 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ALDH1A2O94788 518 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 CRTAMO95727 393 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 CYP2A6P11509 494 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 AOC1P19801 751 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 LHCGRP22888 699 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ADRA1DP25100 572 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 NFKBIAP25963 317 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 NMBRP28336 390 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 VIPR1P32241 457 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 MMP12P39900 470 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 CXCL12P48061 93 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 PXNP49023 591 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ZBTB16Q05516 673 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ARHGEF7Q14155 803 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SLMAPQ14BN4 828 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 BRD3Q15059 726 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TAF1AQ15573 450 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 MAP9Q49MG5 647 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TMEM31Q5JXX7 168 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 UBAP2Q5T6F2 1119 aaKnown RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 AGBL4Q5VU57 503 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 LRRC66Q68CR7 880 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 DPPA4Q7L190 304 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TMC3Q7Z5M5 1100 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 BRSK1Q8TDC3 778 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SPOCK2Q92563 424 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ZNF669Q96BR6 464 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 LRRC39Q96DD0 335 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 ZNF778Q96MU6 729 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TPSD1Q9BZJ3 242 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 CDC42EP4Q9H3Q1 356 aaKnown RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SPATA6Q9NWH7 488 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-207ENST00000550504 HACD3Q9P035 362 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 DLGAP2Q9P1A6 1054 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SLC2A6Q9UGQ3 507 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 SOX13Q9UN79 622 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 NCKAP1Q9Y2A7 1128 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TCAF1Q9Y4C2 921 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 TECTAO75443 2155 aa10.31□□□□□ -0.76
RAB5C-207ENST00000550504 WDFY4Q6ZS81 3184 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 MAGEB16A2A368 324 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 PRR23AA6NEV1 266 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 FAM47DPA6NHR8 397 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 C2orf81A6NN90 581 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CCL22O00626 93 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 MMP20O60882 483 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 GPR37L1O60883 481 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 APBB3O95704 486 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 PGAM1P18669 254 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 LPOP22079 712 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 MAGEA9P43362 315 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TPMTP51580 245 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 PMS2P54278 862 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TAS2R38P59533 333 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CCDC15Q0P6D6 951 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 ELP6Q0PNE2 266 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 RALGDSQ12967 914 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CNGA3Q16281 694 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CDKN3Q16667 212 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 KYNUQ16719 465 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 ANKRD20A4Q4UJ75 823 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TSTD2Q5T7W7 516 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 EMBQ6PCB8 327 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 UNC5AQ6ZN44 842 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 MICALCLQ6ZW33 695 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 PALM2Q8IXS6 379 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 OR4K2Q8NGD2 314 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 OR13C4Q8NGS5 318 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 OR14C36Q8NHC7 312 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 UHMK1Q8TAS1 419 aaKnown RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 UBLCP1Q8WVY7 318 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CAVIN3Q969G5 261 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 RAB7BQ96AH8 199 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 EID2BQ96D98 161 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 MFSD3Q96ES6 412 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 DNAJC1Q96KC8 554 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms