RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 UBP1Q9NZI7 540 aa19.42■□□□□ 0.7
DDX54-207ENST00000550016 SNX11Q9Y5W9 270 aa19.42■□□□□ 0.7
DDX54-207ENST00000550016 NPIPB15A6NHN6 443 aaPredicted RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 FPGTO14772 594 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 OPHN1O60890 802 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 HEXIM1O94992 359 aaKnown RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 ATP1A1P05023 1023 aaKnown RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 ALPIP09923 528 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 CTSKP43235 329 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 ARHGEF7Q14155 803 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 SIX1Q15475 284 aaPredicted RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 CNGA3Q16281 694 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 PCSK7Q16549 785 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 QPCTQ16769 361 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 KDELC1Q6UW63 502 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 GCNT7Q6ZNI0 430 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 CBARPQ8N350 705 aaPredicted RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 MINDY1Q8N5J2 469 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 FAM71DQ8N9W8 422 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 TP53I13Q8NBR0 393 aaPredicted RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 CCDC110Q8TBZ0 833 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 RMDN1Q96DB5 314 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 TMEM121Q9BTD3 319 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 MLPHQ9BV36 600 aaPredicted RBP19.41■□□□□ 0.7
DDX54-207ENST00000550016 KCND1Q9NSA2 647 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 ZKSCAN5Q9Y2L8 839 aa19.41■□□□□ 0.7
DDX54-207ENST00000550016 POM121BA6NF01 834 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 CAPN8A6NHC0 703 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 A6NNZ2 444 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 C4orf47A7E2U8 309 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 F5H423 210 aaPredicted RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 H0Y8X5 98 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 PSMD11O00231 422 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 GCATO75600 419 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 ANXA9O76027 345 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 RECQL5O94762 991 aaPredicted RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 NDST3O95803 873 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 CER1O95813 267 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 EPOP01588 193 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 THEGLP0DJG4 465 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 SDHBP21912 280 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 LHCGRP22888 699 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 STIP1P31948 543 aaKnown RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 GEMP55040 296 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 WNT3AP56704 352 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 NXPH1P58417 271 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 MPP3Q13368 585 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 LRRC14Q15048 493 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 ACOX1Q15067 660 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 OASLQ15646 514 aaKnown RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 CCNG2Q16589 344 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 LONRF2Q1L5Z9 754 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 WSCD2Q2TBF2 565 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 HLA-BQ31612 363 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 CCDC70Q6NSX1 233 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 CRTC1Q6UUV9 634 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 KYAT3Q6YP21 454 aaKnown RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 TSPAN33Q86UF1 283 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 DCP2Q8IU60 420 aaKnown RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 OXNAD1Q96HP4 312 aaPredicted RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 COQ10AQ96MF6 247 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 SMIM14Q96QK8 99 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 GAREM1Q9H706 876 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 DNAAF2Q9NVR5 837 aaKnown RBP19.4■□□□□ 0.7
DDX54-207ENST00000550016 KCTD5Q9NXV2 234 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 ZNF148Q9UQR1 794 aa19.4■□□□□ 0.7
DDX54-207ENST00000550016 LOC285095A0A1B0GVY8 99 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 DFNA5O60443 496 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 ZNF30P17039 623 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 GM2AP17900 193 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 IGFALSP35858 605 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 TNNT3P45378 269 aaPredicted RBP19.39■□□□□ 0.69
DDX54-207ENST00000550016 GNG11P61952 73 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 SNX1Q13596 522 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 GALNT3Q14435 633 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 PRPSAP1Q14558 356 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 Q6ZSR6 202 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 RASGEF1CQ8N431 466 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 OR13H1Q8NG92 308 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 OR2I1PQ8NGU4 316 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 RTP4Q96DX8 246 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 MRGPRX2Q96LB1 330 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 PPP1R2P1Q96PQ5 205 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 LYSMD1Q96S90 227 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 OSBPL9Q96SU4 736 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 GDF3Q9NR23 364 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 MBNL1Q9NR56 388 aaKnown RBP19.39■□□□□ 0.69
DDX54-207ENST00000550016 HOMER3Q9NSC5 361 aa19.39■□□□□ 0.69
DDX54-207ENST00000550016 CDV3Q9UKY7 258 aaKnown RBP19.39■□□□□ 0.69
DDX54-207ENST00000550016 AAR2Q9Y312 384 aaKnown RBP19.39■□□□□ 0.69
DDX54-207ENST00000550016 TOR1BO14657 336 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 ITGAVP06756 1048 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 PSMB4P28070 264 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 RABIFP47224 123 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 IRF4Q15306 451 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 RSPO4Q2I0M5 234 aaPredicted RBP19.38■□□□□ 0.69
DDX54-207ENST00000550016 ZNF423Q2M1K9 1284 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 LRRC66Q68CR7 880 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 DENND2CQ68D51 928 aa19.38■□□□□ 0.69
DDX54-207ENST00000550016 DRICH1Q6PGQ1 229 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms