RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CST6Q15828 149 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 PDPK2PQ6A1A2 396 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 TTC7BQ86TV6 843 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 MMAAQ8IVH4 418 aaKnown RBP17.44■□□□□ 0.38
LETMD1-220ENST00000549686 FBF1Q8TES7 1133 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 TMEM109Q9BVC6 243 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-220ENST00000549686 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-220ENST00000549686 ZFYVE1Q9HBF4 777 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 PLAC1Q9HBJ0 212 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 ZDHHC4Q9NPG8 344 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 SARDHQ9UL12 918 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
LETMD1-220ENST00000549686 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 C1orf232A0A0U1RR37 186 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ZCWPW2A0A1B0GU75 182 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 A0A1W2PQF6 199 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 STX7O15400 261 aaKnown RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 CD72P21854 359 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 TARSP26639 723 aaKnown RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 NMBRP28336 390 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 VIPR1P32241 457 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 PSMD8P48556 350 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ZNF140P52738 457 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 PTPN5P54829 565 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 MGAT5Q09328 741 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ZDHHC20Q5W0Z9 365 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 CAPN12Q6ZSI9 719 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 DPPA4Q7L190 304 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 PARS2Q7L3T8 475 aaKnown RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 SIX5Q8N196 739 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 TTC30BQ8N4P2 665 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 MFSD3Q96ES6 412 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 CERS2Q96G23 380 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 LMAN1LQ9HAT1 526 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 RAD18Q9NS91 495 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 NLE1Q9NVX2 485 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ZNF446Q9NWS9 450 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 RABGEF1Q9UJ41 708 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 PKP3Q9Y446 797 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
LETMD1-220ENST00000549686 EXOC1LA0A1B0GW35 172 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ANTXRLA6NF34 631 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 SLC7A4O43246 635 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 RPP40O75818 363 aaKnown RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 PRKCGP05129 697 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ALPIP09923 528 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 PIRTP0C851 137 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 COPAP53621 1224 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 RPS14P62263 151 aaKnown RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ILF2Q12905 390 aaKnown RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ARHGEF7Q14155 803 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 UBXN2BQ14CS0 331 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 CNGA3Q16281 694 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 CDKN3Q16667 212 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ESRP1Q6NXG1 681 aaKnown RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 CALML6Q8TD86 181 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 SCG3Q8WXD2 468 aaKnown RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ARRDC3Q96B67 414 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 FCRL3Q96P31 734 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 IER2Q9BTL4 223 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 POLMQ9NP87 494 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 C20orf96Q9NUD7 363 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-220ENST00000549686 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 B4GALT6Q9UBX8 382 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 SLC24A2Q9UI40 661 aa17.42■□□□□ 0.38
LETMD1-220ENST00000549686 RGSL1A5PLK6 1076 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 NPIPB15A6NHN6 443 aaPredicted RBP17.41■□□□□ 0.38
LETMD1-220ENST00000549686 FAM159BA6NKW6 160 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 FAM170BA6NMN3 283 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 H0Y858 1186 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 PSMD11O00231 422 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 AP1G1O43747 822 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 DNTTP04053 509 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 ADRB3P13945 408 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 DGKEP52429 567 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 FAM193AP78312 1265 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 PRAMEP78395 509 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 RASA2Q15283 850 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 CRY1Q16526 586 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 KIAA1211LQ6NV74 962 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 CRTC1Q6UUV9 634 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 SYT13Q7L8C5 426 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 LYSMD3Q7Z3D4 306 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 KCNMB4Q86W47 210 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 LRRC6Q86X45 466 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 TMPRSS6Q8IU80 811 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 CBARPQ8N350 705 aaPredicted RBP17.41■□□□□ 0.38
LETMD1-220ENST00000549686 RIBC1Q8N443 379 aaPredicted RBP17.41■□□□□ 0.38
LETMD1-220ENST00000549686 OR13J1Q8NGT2 312 aa17.41■□□□□ 0.38
LETMD1-220ENST00000549686 PBXIP1Q96AQ6 731 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms