RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 EIF3CLB5ME19 914 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 RASA4BC9J798 803 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 AREL1O15033 823 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 RAD51BO15315 384 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SLC31A1O15431 190 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 YKT6O15498 198 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 FGF10O15520 208 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 RASA4O43374 803 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 LRCH4O75427 683 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 TMCC1O94876 653 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 POP4O95707 220 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SERPINC1P01008 464 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 HNRNPA2B1P22626 353 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 PSMA2P25787 234 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 MIPP30301 263 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 HTR7P34969 479 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 RECQLP46063 649 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 DNA2P51530 1060 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KLHL30Q0D2K2 578 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CCDC15Q0P6D6 951 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 BNIP3Q12983 259 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 DPYSQ14117 519 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CYTH1Q15438 398 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 MYLK3Q32MK0 819 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 PARP15Q460N3 678 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 INO80DQ53TQ3 878 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SLC45A4Q5BKX6 768 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 ZNF805Q5CZA5 627 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 ATXN7L2Q5T6C5 722 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KIAA1161Q6NSJ0 714 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 TMPRSS7Q7RTY8 843 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 ARHGAP12Q8IWW6 846 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 OXR1Q8N573 874 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 NETO2Q8NC67 525 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 OR13H1Q8NG92 308 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CASKIN2Q8WXE0 1202 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SYN2Q92777 582 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KLK6Q92876 244 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SKA1Q96BD8 255 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 PPP1R16AQ96I34 528 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 LRIG1Q96JA1 1093 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 BMFQ96LC9 184 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KLF6Q99612 283 aaPredicted RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 MYOCQ99972 504 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 SNRNP25Q9BV90 132 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 ZDHHC6Q9H6R6 413 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CATSPERBQ9H7T0 1116 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CAAP1Q9H8G2 361 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 FZD3Q9NPG1 666 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 DYRK4Q9NR20 520 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 FRRS1LQ9P0K9 344 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 LHX3Q9UBR4 397 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 CNOT8Q9UFF9 292 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 HPCAL4Q9UM19 191 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 NENFQ9UMX5 172 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 AP4E1Q9UPM8 1137 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 MFHAS1Q9Y4C4 1052 aa6.73□□□□□ -1.33
TMEM116-208ENST00000549537 GOLGA4Q13439 2230 aaKnown RBP6.73□□□□□ -1.33
TMEM116-208ENST00000549537 KNTC1P50748 2209 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ARID1BQ8NFD5 2236 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SHROOM3Q8TF72 1996 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 TSPAN11A1L157 253 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 POM121BA6NF01 834 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 J3KR12 359 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 TAF4O00268 1085 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KRIT1O00522 736 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 EIF1AYO14602 144 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 INSIG1O15503 277 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 BUB1O43683 1085 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 MAGEC1O60732 1142 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PRAMEF11O60813 436 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PCDH8O95206 1070 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 GYPCP04921 128 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 UGT2B4P06133 528 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 THEGLP0DJG4 465 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 GIMD1P0DJR0 217 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 MYBL1P10243 752 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 TCF4P15884 667 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 IL1R2P27930 398 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 AKT2P31751 481 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PCK1P35558 622 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ARRB1P49407 418 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ACADVLP49748 655 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 NDST2P52849 883 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 CLDN2P57739 230 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 TPI1P60174 286 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SNRPD1P62314 119 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 RPS21P63220 83 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ZBED6P86452 979 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 STAT4Q14765 748 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SMAD1Q15797 465 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 INAVAQ3KP66 663 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ZSCAN23Q3MJ62 389 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms