RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NTAN1Q96AB6 310 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 CENPTQ96BT3 561 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 SELENOOQ9BVL4 669 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 TM6SF2Q9BZW4 377 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 CDH19Q9H159 772 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 APPL1Q9UKG1 709 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 HPCAL4Q9UM19 191 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 ACTL7AQ9Y615 435 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 PRRC2CQ9Y520 2896 aaKnown RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 TMCO5BA8MYB1 307 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 DDX3XO00571 662 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX54-206ENST00000549271 KDELR3O43731 214 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 RAMP2O60895 175 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 LRIG2O94898 1065 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 PLEKP08567 350 aaPredicted RBP12.28□□□□□ -0.44
DDX54-206ENST00000549271 RNF224P0DH78 156 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 SKILP12757 684 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 UQCRFS1P47985 274 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 ZNF143P52747 638 aaPredicted RBP12.28□□□□□ -0.44
DDX54-206ENST00000549271 OGDHQ02218 1023 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 PPARDQ03181 441 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 KLRB1Q12918 225 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 C16orf72Q14CZ0 275 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 ELOCQ15369 112 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 ASIC2Q16515 512 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 INO80DQ53TQ3 878 aaPredicted RBP12.28□□□□□ -0.44
DDX54-206ENST00000549271 FIGNQ5HY92 759 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 DNAJC24Q6P3W2 148 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 MACC1Q6ZN28 852 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 SCG3Q8WXD2 468 aaKnown RBP12.28□□□□□ -0.44
DDX54-206ENST00000549271 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 DKK3Q9UBP4 350 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 ESPL1Q14674 2120 aa12.28□□□□□ -0.44
DDX54-206ENST00000549271 ITPR3Q14573 2671 aa12.27□□□□□ -0.44
DDX54-206ENST00000549271 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.44
DDX54-206ENST00000549271 PRR19A6NJB7 356 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.45
DDX54-206ENST00000549271 KRIT1O00522 736 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 NEMP1O14524 444 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 CCP110O43303 1012 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 UGT2B4P06133 528 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 KRT7P08729 469 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 ALPIP09923 528 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 GZMAP12544 262 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 CCL4P13236 92 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 PNLIPP16233 465 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 GKP32189 559 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 IGFALSP35858 605 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 SUOXP51687 545 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 MLLT10P55197 1068 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 UBASH3AP57075 661 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 MAMLD1Q13495 774 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.45
DDX54-206ENST00000549271 LACTB2Q53H82 288 aaPredicted RBP12.27□□□□□ -0.45
DDX54-206ENST00000549271 FHL5Q5TD97 284 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 CAPRIN2Q6IMN6 1127 aaKnown RBP12.27□□□□□ -0.45
DDX54-206ENST00000549271 PLEKHA7Q6IQ23 1121 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 RWDD4Q6NW29 188 aaKnown RBP12.27□□□□□ -0.45
DDX54-206ENST00000549271 GDPD4Q6W3E5 623 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 SPRED1Q7Z699 444 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 GPR156Q8NFN8 814 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 OR6K2Q8NGY2 324 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 HCAR2Q8TDS4 363 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 KLHL32Q96NJ5 620 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 MCEEQ96PE7 176 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 CNPY3Q9BT09 278 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 C1QTNF7Q9BXJ2 289 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 SEMA6CQ9H3T2 930 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 GGT7Q9UJ14 662 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 DOLKQ9UPQ8 538 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 ITM2BQ9Y287 266 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 PCDHGA3Q9Y5H0 932 aa12.27□□□□□ -0.45
DDX54-206ENST00000549271 ARHGEF17Q96PE2 2063 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 WASH4PA8MWX3 477 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 FTLP02792 175 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 UGT1A3P35503 534 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 EIF4A3P38919 411 aaKnown RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 PEX5P50542 639 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 BLKP51451 505 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 HK3P52790 923 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 YBEYP58557 167 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 TPM4P67936 248 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 RAD51Q06609 339 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 KLHL30Q0D2K2 578 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 EFHC2Q5JST6 749 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 HGSNATQ68CP4 663 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 TTC7BQ86TV6 843 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 PYROXD2Q8N2H3 581 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 RYBPQ8N488 228 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 IL22RA1Q8N6P7 574 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 ARFGAP1Q8N6T3 406 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms