RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RNF169Q8NCN4 708 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 PDPRQ8NCN5 879 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 TNIP3Q96KP6 325 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 SPATC1LQ9H0A9 340 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 FBXO5Q9UKT4 447 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF232Q9UNY5 417 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 PLXNA1Q9UIW2 1896 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 TTC24A2A3L6 582 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 J3QRK9 145 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 CPNE6O95741 557 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 BCL10O95999 233 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 LTA4HP09960 611 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 FUT4P22083 530 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 OXTRP30559 389 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 RPS9P46781 194 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 NDUFV1P49821 464 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 LAMC2Q13753 1193 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 PRAMEF18Q5VWM3 479 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 OR13F1Q8NGS4 319 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 FBXL8Q96CD0 374 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 C19orf60Q96EN9 201 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 SEPT3Q9UH03 358 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ERGIC3Q9Y282 383 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ZSWIM8A7E2V4 1837 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ALDOCP09972 364 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 GFAPP14136 432 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF280DQ6N043 979 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 CYHR1Q6ZMK1 362 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ZC3H7AQ8IWR0 971 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 KLHDC8BQ8IXV7 354 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 SLC15A4Q8N697 577 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 PTCD2Q8WV60 388 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 GSTO2Q9H4Y5 243 aa23.19■■□□□ 1.3
NPAS3-206ENST00000548645 TRNAU1APQ9NX07 287 aaKnown RBP23.19■■□□□ 1.3
NPAS3-206ENST00000548645 ARPC2O15144 300 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 ADAM23O75077 832 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 BTG3Q14201 252 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 ARL13BQ3SXY8 428 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 HFE2Q6ZVN8 426 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 SPATA22Q8NHS9 363 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 ZFYVE28Q9HCC9 887 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 WDR6Q9NNW5 1121 aaKnown RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 FBXW11Q9UKB1 542 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 TXNP10599 105 aaKnown RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 CYP51A1Q16850 503 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 SPATS1Q496A3 300 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 EGFLAMQ63HQ2 1017 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 GADL1Q6ZQY3 521 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 FBXO16Q8IX29 292 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 USP33Q8TEY7 942 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 MTG1Q9BT17 334 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 ARMC7Q9H6L4 198 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 CMTM6Q9NX76 183 aa23.18■■□□□ 1.3
NPAS3-206ENST00000548645 IFT80Q9P2H3 777 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-206ENST00000548645 CACNG3O60359 315 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 ZBTB7AO95365 584 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 IMPDH1P20839 514 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 TNK2Q07912 1038 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 VPS26BQ4G0F5 336 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 USP51Q70EK9 711 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 APPL2Q8NEU8 664 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 IPMKQ8NFU5 416 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 MAGEE2Q8TD90 523 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-206ENST00000548645 SLC2A6Q9UGQ3 507 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 SHROOM3Q8TF72 1996 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 I6L893 689 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-206ENST00000548645 RFC2P35250 354 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 RBM20Q5T481 1227 aaKnown RBP23.17■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF618Q5T7W0 954 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 CCDC117Q8IWD4 279 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-206ENST00000548645 KCTD13Q8WZ19 329 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 PPP1R10Q96QC0 940 aaKnown RBP23.17■■□□□ 1.3
NPAS3-206ENST00000548645 AKTIPQ9H8T0 292 aa23.17■■□□□ 1.3
NPAS3-206ENST00000548645 UBFD1O14562 309 aaKnown RBP23.16■■□□□ 1.3
NPAS3-206ENST00000548645 ANXA9O76027 345 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 NPR3P17342 541 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 ACAP2Q15057 778 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 ZNF773Q6PK81 442 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 MIER2Q8N344 545 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 DPF3Q92784 378 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 NRBF2Q96F24 287 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 MUC13Q9H3R2 512 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 RIC8BQ9NVN3 520 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 INTS10Q9NVR2 710 aaKnown RBP23.16■■□□□ 1.3
NPAS3-206ENST00000548645 CORINQ9Y5Q5 1042 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 INPP4BO15327 924 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 SUPT7LO94864 414 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 PGK2P07205 417 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 MATN1P21941 496 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 SLC6A2P23975 617 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 YAP1P46937 504 aaKnown RBP23.16■■□□□ 1.3
NPAS3-206ENST00000548645 KIAA0930Q6ICG6 404 aaPredicted RBP23.16■■□□□ 1.3
NPAS3-206ENST00000548645 GALNT18Q6P9A2 607 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 KIAA0408Q6ZU52 694 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 B3GALNT2Q8NCR0 500 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 KLRG1Q96E93 195 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 TSPAN17Q96FV3 270 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 C3orf30Q96M34 536 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 TSGA13Q96PP4 275 aa23.16■■□□□ 1.3
NPAS3-206ENST00000548645 NUP205Q92621 2012 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms